RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 LSM14BQ9BX40 385 aaKnown RBP11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 UBXN6Q9BZV1 441 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 BRD9Q9H8M2 597 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 LRRC4Q9HBW1 653 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 TDP1Q9NUW8 608 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 OBP2AQ9NY56 170 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 DNAJC12Q9UKB3 198 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 TSPAN16Q9UKR8 245 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 DUSP12Q9UNI6 340 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 DAAM1Q9Y4D1 1078 aa11.11□□□□□ -0.63
AC012339.1-201ENST00000505564 DENND4AQ7Z401 1863 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 LGALS16A8MUM7 142 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 HEPACAM2A8MVW5 462 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 M0QYV0 167 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 ZNF263O14978 683 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 THAP12O43422 761 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 GNA15P30679 374 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 KRT9P35527 623 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 SNX16P57768 344 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 FOXC1Q12948 553 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 STXBP5Q5T5C0 1151 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 LCLAT1Q6UWP7 414 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 MFSD6LQ8IWD5 586 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 SIX6OS1Q8N1H7 587 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 UBR7Q8N806 425 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 ST13P5Q8NFI4 369 aaPredicted RBP11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 NEK11Q8NG66 645 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 SCAMP5Q8TAC9 235 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 GOLGA1Q92805 767 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 SHDQ96IW2 340 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 KREMEN1Q96MU8 473 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 CDK5RAP1Q96SZ6 601 aaKnown RBP11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 SLC46A2Q9BY10 475 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 PLCB1Q9NQ66 1216 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 CEP83Q9Y592 693 aa11.1□□□□□ -0.63
AC012339.1-201ENST00000505564 ZNF840PA6NDX5 716 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 TMEM221A6NGB7 291 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 LRRC10BA6NIK2 292 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 M0R296 226 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 O00370 1275 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 TNFRSF10BO14763 440 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 XPO1O14980 1071 aaKnown RBP11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 BEST1O76090 585 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 RALAP11233 206 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 UCHL3P15374 230 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 ZNF18P17022 549 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 BRD2P25440 801 aaKnown RBP11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 GDI1P31150 447 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 VIPR2P41587 438 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 TKTL1P51854 596 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 GPC5P78333 572 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 GOLGA8FQ08AF8 430 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 GOLGA8DPQ0D2H9 430 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 GRM2Q14416 872 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 ARHGAP29Q52LW3 1261 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 HECTD3Q5T447 861 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 GJB7Q6PEY0 223 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 CACNA2D4Q7Z3S7 1137 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 BMP8AQ7Z5Y6 402 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 TMEM150AQ86TG1 271 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 FMNL3Q8IVF7 1028 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 SUGP1Q8IWZ8 645 aaKnown RBP11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 DHX40Q8IX18 779 aaKnown RBP11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 ARL14EPQ8N8R7 260 aaPredicted RBP11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 ZMIZ2Q8NF64 920 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 UBA3Q8TBC4 463 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 BPIFB1Q8TDL5 484 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 CSGALNACT1Q8TDX6 532 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 SHC3Q92529 594 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 NOX5Q96PH1 765 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 STK33Q9BYT3 514 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 SLC2A4RGQ9NR83 387 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 FAM207AQ9NSI2 230 aaPredicted RBP11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 TMEM30AQ9NV96 361 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 WNT16Q9UBV4 365 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 CNTN6Q9UQ52 1028 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 SCML2Q9UQR0 700 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 WDFY4Q6ZS81 3184 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 NCANO14594 1321 aa11.09□□□□□ -0.63
AC012339.1-201ENST00000505564 C2orf78A6NCI8 922 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 RNF225M0QZC1 329 aaPredicted RBP11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 NARSO43776 548 aaKnown RBP11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 ZBED1O96006 694 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 TPM3P06753 285 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 MBL2P11226 248 aaPredicted RBP11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 FCARP24071 287 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 TUBP50607 506 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 KIF11P52732 1056 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 PDE4CQ08493 712 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 ZNF268Q14587 947 aaPredicted RBP11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 DRAP1Q14919 205 aaPredicted RBP11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 NCAPHQ15003 741 aa11.08□□□□□ -0.64
AC012339.1-201ENST00000505564 SYCP1Q15431 976 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms