RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 FAM49AQ9H0Q0 323 aaPredicted RBP17.67■□□□□ 0.42
LIN54-204ENST00000505397 SAR1AQ9NR31 198 aa17.67■□□□□ 0.42
LIN54-204ENST00000505397 LNPEPQ9UIQ6 1025 aa17.67■□□□□ 0.42
LIN54-204ENST00000505397 FAM155AB1AL88 458 aaPredicted RBP17.66■□□□□ 0.42
LIN54-204ENST00000505397 GPR25O00155 361 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 ERBB2P04626 1255 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 STAG3L1P0CL83 205 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 GABRB2P47870 512 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 DPYSL3Q14195 570 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 ACAP1Q15027 740 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 KYAT1Q16773 422 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 PDIK1LQ8N165 341 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 FAM13CQ8NE31 585 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 XPO7Q9UIA9 1087 aaKnown RBP17.66■□□□□ 0.42
LIN54-204ENST00000505397 GINS2Q9Y248 185 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 NUMBLQ9Y6R0 609 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.66■□□□□ 0.42
LIN54-204ENST00000505397 ENDOD1O94919 500 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 DHRS4L1P0CG22 281 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 GNAZP19086 355 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 RASSF2P50749 326 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 MFSD10Q14728 455 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 SH2D5Q6ZV89 423 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 PALM2Q8IXS6 379 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 EMC1Q8N766 993 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 MCRS1Q96EZ8 462 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 BATF3Q9NR55 127 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 METTL5Q9NRN9 209 aaKnown RBP17.66■□□□□ 0.42
LIN54-204ENST00000505397 CITO14578 2027 aa17.66■□□□□ 0.42
LIN54-204ENST00000505397 PEX11AO75192 247 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 TRUB2O95900 331 aaKnown RBP17.65■□□□□ 0.42
LIN54-204ENST00000505397 CDC42EP1Q00587 391 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 KIZQ2M2Z5 673 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 TAF1BQ53T94 588 aaPredicted RBP17.65■□□□□ 0.42
LIN54-204ENST00000505397 FYB2Q5VWT5 728 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 ANKRD27Q96NW4 1050 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 DONSONQ9NYP3 566 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 SIX4Q9UIU6 781 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 RPL26L1Q9UNX3 145 aaKnown RBP17.65■□□□□ 0.42
LIN54-204ENST00000505397 TSPAN1O60635 241 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 PIAS1O75925 651 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 MYL3P08590 195 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 CD19P15391 556 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 MIPP30301 263 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 RAP1GAPP47736 663 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 EIF3EP60228 445 aaKnown RBP17.65■□□□□ 0.42
LIN54-204ENST00000505397 RNASELQ05823 741 aaKnown RBP17.65■□□□□ 0.42
LIN54-204ENST00000505397 TAF5Q15542 800 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 ANKRD20A2Q5SQ80 823 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 ANKRD20A1Q5TYW2 823 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 ANKRD20A3Q5VUR7 823 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 IGDCC3Q8IVU1 814 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 TMEM192Q8IY95 271 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 FAM71DQ8N9W8 422 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 KCTD6Q8NC69 237 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 GCOM2Q9BZD3 368 aaPredicted RBP17.65■□□□□ 0.42
LIN54-204ENST00000505397 SDCBP2Q9H190 292 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 RNPEPL1Q9HAU8 725 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 NPHS2Q9NP85 383 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 SLC17A7Q9P2U7 560 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 NKX1-2Q9UD57 310 aaPredicted RBP17.65■□□□□ 0.42
LIN54-204ENST00000505397 GJD2Q9UKL4 321 aa17.65■□□□□ 0.42
LIN54-204ENST00000505397 HNRNPCL1O60812 293 aaKnown RBP17.64■□□□□ 0.42
LIN54-204ENST00000505397 CBX6O95503 412 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 KRT19P08727 400 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 GM2AP17900 193 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 ETV4P43268 484 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 BBS9Q3SYG4 887 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 CLNKQ7Z7G1 428 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 RFX6Q8HWS3 928 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 SLC4A11Q8NBS3 891 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 SH3TC2Q8TF17 1288 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 CYTH2Q99418 400 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 KATNAL1Q9BW62 490 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 MANSC1Q9H8J5 431 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 NXF1Q9UBU9 619 aaKnown RBP17.64■□□□□ 0.42
LIN54-204ENST00000505397 ZFP69BQ9UJL9 534 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 Q9Y3F1 56 aa17.64■□□□□ 0.42
LIN54-204ENST00000505397 E7ENQ6 273 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 KIF1CO43896 1103 aaKnown RBP17.64■□□□□ 0.41
LIN54-204ENST00000505397 RBP3P10745 1247 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 CYP2C9P11712 490 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 CALB2P22676 271 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 PTPN4P29074 926 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 PCK1P35558 622 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 PSEN2P49810 448 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 NEK3P51956 506 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 SLC18A2Q05940 514 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 TMEM62Q0P6H9 643 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 APBB1IPQ7Z5R6 666 aaPredicted RBP17.64■□□□□ 0.41
LIN54-204ENST00000505397 LONP2Q86WA8 852 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 CHSY1Q86X52 802 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 ENDOVQ8N8Q3 282 aaKnown RBP17.64■□□□□ 0.41
LIN54-204ENST00000505397 RSAD1Q9HA92 442 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 USP18Q9UMW8 372 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 TEX264Q9Y6I9 313 aa17.64■□□□□ 0.41
LIN54-204ENST00000505397 CA12O43570 354 aa17.63■□□□□ 0.41
LIN54-204ENST00000505397 TROVE2P10155 538 aaKnown RBP eCLIP17.63■□□□□ 0.41
LIN54-204ENST00000505397 AKR1A1P14550 325 aa17.63■□□□□ 0.41
LIN54-204ENST00000505397 STIP1P31948 543 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms