RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 ATXN3P54252 364 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 CLDN10P78369 228 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 EHHADHQ08426 723 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 ANO4Q32M45 955 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 SH3PXD2AQ5TCZ1 1133 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 UNC93AQ86WB7 457 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 PARD3BQ8TEW8 1205 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 HMGB4Q8WW32 186 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 XPO6Q96QU8 1125 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 KCNK16Q96T55 309 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 BLZF1Q9H2G9 400 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.536e-7■■■■■ 62.1
UBE2D3-219ENST00000505207 SPHK2Q9NRA0 654 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 EXOC1Q9NV70 894 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 WDR35Q9P2L0 1181 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 LSM7Q9UK45 103 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 ANAPC1Q9H1A4 1944 aa11.77□□□□□ -0.53
UBE2D3-219ENST00000505207 KMT2BQ9UMN6 2715 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 TCRBV21S2A2A0A5A6 115 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 FAM92AA1XBS5 289 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 SCAMP3O14828 347 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 IKBKBO14920 756 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 ZNF217O75362 1048 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 TULP3O75386 442 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 PROS1P07225 676 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 BCKDHBP21953 392 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 NTSR1P30989 418 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 CLCN6P51797 869 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 CACNA2D1P54289 1103 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 CDH8P55286 799 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 IRX4P78413 519 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 KDSRQ06136 332 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 ZNF252P-AS1Q0IIN9 211 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 E2F5Q15329 346 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 UAP1L1Q3KQV9 507 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 LYSMD4Q5XG99 296 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 GRAMD4Q6IC98 578 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 CRYBG2Q8N1P7 616 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 ZNF513Q8N8E2 541 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 NAT16Q8N8M0 369 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 SCAMP5Q8TAC9 235 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 SMYD3Q9H7B4 428 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 USP25Q9UHP3 1055 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 NME7Q9Y5B8 376 aa11.76□□□□□ -0.53
UBE2D3-219ENST00000505207 ABCA7Q8IZY2 2146 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 LRRIQ3A6PVS8 624 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 PDXKO00764 312 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 TLR5O60602 858 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 C4BPAP04003 597 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 MYL1P05976 194 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 SLFN14P0C7P3 912 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 ZDHHC11BP0C7U3 371 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 ZSCAN22P10073 491 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 EMC10Q5UCC4 262 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 RESP18Q5W5W9 173 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 ETFBKMTQ8IXQ9 262 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 TMEFF1Q8IYR6 380 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 HDDC3Q8N4P3 179 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 CCDC150Q8NCX0 1101 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 RLN3Q8WXF3 142 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 KRT82Q9NSB4 513 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 TMEM30AQ9NV96 361 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 DMAC2Q9NW81 257 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 GMIPQ9P107 970 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 STARD13Q9Y3M8 1113 aa11.75□□□□□ -0.53
UBE2D3-219ENST00000505207 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 TMEM8BA6NDV4 472 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CDX4O14627 284 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 ADAM23O75077 832 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CFIP05156 583 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 IRF1P10914 325 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 HOXB2P14652 356 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 CASP4P49662 377 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 PSEN1P49768 467 aa11.74□□□□□ -0.53
UBE2D3-219ENST00000505207 NDST1P52848 882 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms