RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CDK5RAP1Q96SZ6 601 aaKnown RBP8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 PRMT1Q99873 361 aaKnown RBP8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 TRIM5Q9C035 493 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 NHEJ1Q9H9Q4 299 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 LCMT1Q9UIC8 334 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 CXorf51AA0A1B0GTR3 108 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 C2CD4BA6NLJ0 364 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 C2CD2LO14523 706 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 THAP12O43422 761 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 XYLBO75191 536 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 ECI2O75521 394 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 ARSEP51690 589 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC6A3Q01959 620 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 SCAPQ12770 1279 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 DDR2Q16832 855 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 GAB4Q2WGN9 574 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLFN11Q7Z7L1 901 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 TMEM35BQ8NCS4 154 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 MAFAQ8NHW3 353 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 USP15Q9Y4E8 981 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 EML5Q05BV3 1969 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 FANCMQ8IYD8 2048 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 SOAT2O75908 522 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 TMEM253P0C7T8 217 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 HOXC13P31276 330 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 TAZQ16635 292 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 MANEALQ5VSG8 457 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 TMTC1Q8IUR5 882 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 SCAMP5Q8TAC9 235 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 UBE2Q2Q8WVN8 375 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 HLA-CQ95604 372 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 POMKQ9H5K3 350 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 RETREG1Q9H6L5 497 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 CYP4F11Q9HBI6 524 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 HCFC1R1Q9NWW0 138 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 ABI2Q9NYB9 513 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 RRN3Q9NYV6 651 aa8.71□□□□□ -1.02
CDC42SE2-208ENST00000505065 E5RJQ4 531 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 M0QYV0 167 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZBED1O96006 694 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 SEMA3BQ13214 749 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 MTMR3Q13615 1198 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 HTR4Q13639 388 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 RAPGEF1Q13905 1077 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 KIAA0907Q7Z7F0 614 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 VSIG1Q86XK7 387 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ARFGAP1Q8N6T3 406 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ASB16Q96NS5 453 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZNF212Q9UDV6 495 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 SCN8AQ9UQD0 1980 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 PRRC2BQ5JSZ5 2229 aaKnown RBP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 TMEM191CA6NGB0 347 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZNF487B1APH4 448 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 SLC34A2O95436 690 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 CEBPBP17676 345 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 MAMLD1Q13495 774 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ACAP1Q15027 740 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 NXPE3Q969Y0 559 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 RSPRY1Q96DX4 576 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 PGLYRP2Q96PD5 576 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 TRIM62Q9BVG3 475 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 KIF9Q9HAQ2 790 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 CALB1P05937 261 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ADKP55263 362 aaKnown RBP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 CYP27A1Q02318 531 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 CLEC4CQ8WTT0 213 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 CD101Q93033 1021 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 TRIM11Q96F44 468 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ANKRD62A6NC57 917 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 YJEFN3A6XGL0 299 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 E7ENQ6 273 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZNF197O14709 1029 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 SART1O43290 800 aaKnown RBP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 KRT5P13647 590 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 YWHAQP27348 245 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 EIF4A3P38919 411 aaKnown RBP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ALDH1A3P47895 512 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZP2Q05996 745 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 PABPC1LQ4VXU2 614 aaKnown RBP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZNF394Q53GI3 561 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 HTR3DQ70Z44 454 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 CCDC112Q8NEF3 446 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 E2F7Q96AV8 911 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 P2RY11Q96G91 374 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 FCRL2Q96LA5 508 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 RIPOR3Q96MK2 946 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 TASP1Q9H6P5 420 aa8.7□□□□□ -1.02
CDC42SE2-208ENST00000505065 IGLV3-10A0A075B6K4 115 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 I6L893 689 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ADORA2BP29275 332 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 KLHL30Q0D2K2 578 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ADIGQ0VDE8 80 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ACBD5Q5T8D3 534 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 GLYCTKQ8IVS8 523 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 PHTF2Q8N3S3 785 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms