RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 DEPTORQ8TB45 409 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 TAS1R2Q8TE23 839 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 ATP6V0A1Q93050 837 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SDCCAG3Q96C92 435 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SRPK1Q96SB4 655 aaKnown RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 EBF4Q9BQW3 602 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 CSADQ9Y600 493 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 KCNH1O95259 989 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 CETPP11597 493 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 ENTPD1P49961 510 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 DMP1Q13316 513 aaPredicted RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 RIPK1Q13546 671 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 PWP1Q13610 501 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 CCDC14Q49A88 953 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 NADK2Q4G0N4 442 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 RSBN1Q5VWQ0 802 aaPredicted RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 MFSD7Q6UXD7 560 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 C11orf74Q86VG3 221 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 BHLHE22Q8NFJ8 381 aaPredicted RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 FBXO27Q8NI29 283 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SPATA20Q8TB22 786 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SEC14L1Q92503 715 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SLC35C1Q96A29 364 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 EXOSC4Q9NPD3 245 aaKnown RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 TEKT2Q9UIF3 430 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 ZNF804BA4D1E1 1349 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 A6NL46 340 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SPATA31D3P0C874 917 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 ALDH1A3P47895 512 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 KLRC3Q07444 240 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 PITRM1Q5JRX3 1037 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SPATA31D4Q6ZUB0 917 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 GATAD2AQ86YP4 633 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 BPIFB6Q8NFQ5 453 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 GLMNQ92990 594 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 LXNQ9BS40 222 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 WDR55Q9H6Y2 383 aaPredicted RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 PNMA8BQ9ULN7 279 aaPredicted RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 SOX13Q9UN79 622 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 NR2E3Q9Y5X4 410 aa8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 RBBP6Q7Z6E9 1792 aaKnown RBP8.09□□□□□ -1.11
ATP2C1-208ENST00000504948 FOCADQ5VW36 1801 aa8.09□□□□□ -1.12
ATP2C1-208ENST00000504948 CCNT2O60583 730 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 EDF1O60869 148 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 SEMA3DO95025 777 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 KRT3P12035 628 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 CCDC130P13994 396 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 ZNF23P17027 643 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 NFX1Q12986 1120 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 TSTA3Q13630 321 aaPredicted RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 LPIN1Q14693 890 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 ZNF618Q5T7W0 954 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 IRF2BP2Q7Z5L9 587 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 DHDDSQ86SQ9 333 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 SLFN12Q8IYM2 578 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 USP33Q8TEY7 942 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 CEP19Q96LK0 163 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 PRRG3Q9BZD7 231 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 CCDC134Q9H6E4 229 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 POLR1BQ9H9Y6 1135 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 MRPL47Q9HD33 250 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 TAGLN3Q9UI15 199 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 CNTNAP4Q9C0A0 1308 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 TRIM64CA6NLI5 447 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 TFECO14948 347 aaPredicted RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 SH3BP5O60239 455 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 NPTXRO95502 500 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 PCNAP12004 261 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 RGS2P41220 211 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 RAP1GDS1P52306 607 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 STX1BP61266 288 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 CDK16Q00536 496 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 PPP1R8Q12972 351 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 PDAP1Q13442 181 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 FAM98CQ17RN3 349 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 TRMT5Q32P41 509 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 C6orf10Q5SRN2 563 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 UBE2J2Q8N2K1 259 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 TTLL6Q8N841 843 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 FAM47BQ8NA70 645 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 GLIS1Q8NBF1 620 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 PPP1R14BQ96C90 147 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 FAM84BQ96KN1 310 aaPredicted RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 AMNQ9BXJ7 453 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 CCDC167Q9P0B6 97 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 ARIH1Q9Y4X5 557 aaPredicted RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 COMMD3-BMI1R4GMX3 469 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 PCDH11YQ9BZA8 1340 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 SPEF2Q9C093 1822 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 INO80B-WBP1J3KQ70 363 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 PRPSAP2O60256 369 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 NRP2O60462 931 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 TRMUO75648 421 aaKnown RBP8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 BCAR1P56945 870 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 LAMC2Q13753 1193 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 FIGNQ5HY92 759 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 MTX3Q5HYI7 312 aa8.08□□□□□ -1.12
ATP2C1-208ENST00000504948 CCDC80Q76M96 950 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms