RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KIAA1549LQ6ZVL6 1849 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 C2orf78A6NCI8 922 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SOWAHDA6NJG2 315 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 PIK3R2O00459 728 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 PRRG1O14668 218 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ABL1P00519 1130 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 CSH1P0DML2 217 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 CSH2P0DML3 217 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ANXA13P27216 316 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 WEE1P30291 646 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 FLT3P36888 993 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SCNN1AP37088 669 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 RGS7P49802 495 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 TKTL1P51854 596 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 RPL10AP62906 217 aaKnown RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 MRPS5P82675 430 aaKnown RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 OGDHQ02218 1023 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 GFPT1Q06210 699 aaPredicted RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 KLHL30Q0D2K2 578 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ADIGQ0VDE8 80 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 TAF10Q12962 218 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 TCEAL1Q15170 157 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SMAD2Q15796 467 aaKnown RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 CCDC85BQ15834 202 aaPredicted RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ASIC2Q16515 512 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 PPM1LQ5SGD2 360 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 RARS2Q5T160 578 aaKnown RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SYPL2Q5VXT5 272 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 NAA35Q5VZE5 725 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 PLEKHA7Q6IQ23 1121 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ACAD10Q6JQN1 1059 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 FAM183BPQ6ZVS7 135 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 BEND5Q7L4P6 421 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SLC26A9Q7LBE3 791 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SCN4BQ8IWT1 228 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 LRRC8AQ8IWT6 810 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 NPAS3Q8IXF0 933 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 MCOLN2Q8IZK6 566 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ARFGAP1Q8N6T3 406 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SPC24Q8NBT2 197 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 TMEM35BQ8NCS4 154 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 MAFAQ8NHW3 353 aaPredicted RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 OVCA2Q8WZ82 227 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 PPP2R3CQ969Q6 453 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 WBP2Q969T9 261 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 RSPRY1Q96DX4 576 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 VCPIP1Q96JH7 1222 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 PPP1R13BQ96KQ4 1090 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ZSWIM3Q96MP5 696 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SLC2A13Q96QE2 648 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 SLC46A2Q9BY10 475 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ULBP1Q9BZM6 244 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 TRIM7Q9C029 511 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 NHEJ1Q9H9Q4 299 aaPredicted RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 COMMD8Q9NX08 183 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 CLIC5Q9NZA1 410 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 COG5Q9UP83 839 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 USP15Q9Y4E8 981 aaPredicted RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 BZW2Q9Y6E2 419 aaKnown RBP5.2□□□□□ -1.58
LMNB1-208ENST00000504788 ATP8B3O60423 1300 aa5.2□□□□□ -1.58
LMNB1-208ENST00000504788 TTC28Q96AY4 2481 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 WDFY4Q6ZS81 3184 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 A0A1W2PRU2 124 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 FAM170AA1A519 330 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 GFRA2O00451 464 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 MED7O43513 233 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 RTN2O75298 545 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 ENDOD1O94919 500 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 GJB6O95452 261 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 ZBED1O96006 694 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 IGLV3-27P01718 113 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 LRG1P02750 347 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 USP17L7P0C7H9 530 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 BMP1P13497 986 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 IL9P15248 144 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 GJA1P17302 382 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 CEBPBP17676 345 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 PTPN2P17706 415 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 TFE3P19532 575 aaPredicted RBP5.19□□□□□ -1.58
LMNB1-208ENST00000504788 KCNA5P22460 613 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 RRM1P23921 792 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 YWHAQP27348 245 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 CA8P35219 290 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 ALDH1A3P47895 512 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 TUBP50607 506 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 RPL7AP62424 266 aaKnown RBP5.19□□□□□ -1.58
LMNB1-208ENST00000504788 SMAD4Q13485 552 aaKnown RBP5.19□□□□□ -1.58
LMNB1-208ENST00000504788 CBX2Q14781 532 aaPredicted RBP5.19□□□□□ -1.58
LMNB1-208ENST00000504788 RAB6CQ53S08 254 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 CYP4A22Q5TCH4 519 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 LIN9Q5TKA1 542 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 ALKBH5Q6P6C2 394 aaKnown RBP5.19□□□□□ -1.58
LMNB1-208ENST00000504788 KLHDC10Q6PID8 442 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 TRIM72Q6ZMU5 477 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 CYP4V2Q6ZWL3 525 aaPredicted RBP5.19□□□□□ -1.58
LMNB1-208ENST00000504788 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 C3orf20Q8ND61 904 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 IRGQQ8WZA9 623 aa5.19□□□□□ -1.58
LMNB1-208ENST00000504788 SMG7Q92540 1137 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms