RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 RNF38Q9H0F5 515 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 CLSTN2Q9H4D0 955 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 TRPV5Q9NQA5 729 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 KRT82Q9NSB4 513 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 TDP1Q9NUW8 608 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 OBP2AQ9NY56 170 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 IL37Q9NZH6 218 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 COQ4Q9Y3A0 265 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 PIAS3Q9Y6X2 628 aa8.49□□□□□ -1.05
RFC1-207ENST00000504554 OAS1P00973 400 aaKnown RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 CALCAP01258 141 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 P4HA1P13674 534 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 ARSAP15289 507 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 ANXA13P27216 316 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 AVPR1AP37288 418 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 FMO5P49326 533 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 SLC5A3P53794 718 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 RAD23BP54727 409 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 MAP3K7CLP57077 242 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 LRMPQ12912 555 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 USP4Q13107 963 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 PAK1Q13153 545 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 GAS6Q14393 721 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 ANGPT1Q15389 498 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 ZNF77Q15935 545 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 PPP1R26Q5T8A7 1209 aaPredicted RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 CLEC20AQ6ZU45 233 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 FRMD5Q7Z6J6 570 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 IRF2BP1Q8IU81 584 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 YAF2Q8IY57 180 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 NUP93Q8N1F7 819 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 CELF5Q8N6W0 485 aaKnown RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 SLC4A11Q8NBS3 891 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 GPT2Q8TD30 523 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 MRPS31Q92665 395 aaKnown RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 IRF7Q92985 503 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 WBP2Q969T9 261 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 E2F7Q96AV8 911 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 CLDN23Q96B33 292 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 TNIP3Q96KP6 325 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 HNRNPABQ99729 332 aaKnown RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 FAM83CQ9BQN1 747 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 CYP3A43Q9HB55 503 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 CSNK1G1Q9HCP0 422 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 GKN1Q9NS71 199 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 CISHQ9NSE2 258 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 RBM12Q9NTZ6 932 aaKnown RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 C2orf42Q9NWW7 574 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 OSER1Q9NX31 292 aa8.48□□□□□ -1.05
RFC1-207ENST00000504554 UXTQ9UBK9 157 aaPredicted RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 ARMCX3Q9UH62 379 aaPredicted RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 CHORDC1Q9UHD1 332 aaPredicted RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 NDRG2Q9UN36 371 aaKnown RBP8.48□□□□□ -1.05
RFC1-207ENST00000504554 PTPRDP23468 1912 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 FAM92AA1XBS5 289 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 ANTXRLA6NF34 631 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 SOBPA7XYQ1 873 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 SPECC1L-ADORA2AF8WAN1 911 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 RNF225M0QZC1 329 aaPredicted RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 TULP2O00295 520 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 SCAMP3O14828 347 aaKnown RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 OLFM2O95897 454 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 ZDHHC11BP0C7U3 371 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 CHRNB1P11230 501 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 YWHAQP27348 245 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 STIM1Q13586 685 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 CUL2Q13617 745 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 ZNF268Q14587 947 aaPredicted RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 MAP7D1Q3KQU3 841 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 CCDC40Q4G0X9 1142 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 ARHGAP29Q52LW3 1261 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 FOXR2Q6PJQ5 311 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 ZNF852Q6ZMS4 543 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 ARHGEF19Q8IW93 802 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 TRIM59Q8IWR1 403 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 TTC16Q8NEE8 873 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 SH3RF2Q8TEC5 729 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 FAM3CQ92520 227 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 ATOH1Q92858 354 aaPredicted RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 FBXO32Q969P5 355 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 JAKMIP2Q96AA8 810 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 CYFIP2Q96F07 1278 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 SMARCD1Q96GM5 515 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 SHDQ96IW2 340 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 CEP295NLQ96MC4 621 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 ZSWIM1Q9BR11 485 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 NT5C1AQ9BXI3 368 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 SRRTQ9BXP5 876 aaKnown RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 GTPBP4Q9BZE4 634 aaKnown RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 IMPG2Q9BZV3 1241 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 LINC00597Q9H2U6 94 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 EBF3Q9H4W6 596 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 CCSER2Q9H7U1 834 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 NMUR1Q9HB89 426 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 FBRSL1Q9HCM7 1045 aaKnown RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 DMAP1Q9NPF5 467 aaPredicted RBP8.47□□□□□ -1.05
RFC1-207ENST00000504554 TRPM5Q9NZQ8 1165 aa8.47□□□□□ -1.05
RFC1-207ENST00000504554 GMIPQ9P107 970 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms