RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 AGPAT1Q99943 283 aa14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 LHX5Q9H2C1 402 aa14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 GDE1Q9NZC3 331 aa14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 PRKAG3Q9UGI9 489 aa14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 SCML2Q9UQR0 700 aa14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 ZFP37Q9Y6Q3 630 aaPredicted RBP14.08□□□□□ -0.16
PGGT1B-204ENST00000503638 A0A1W2PQH9 124 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 C2orf78A6NCI8 922 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 ZNF840PA6NDX5 716 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 GOLGA6L6A8MZA4 724 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 E5RJQ4 531 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 NRG2O14511 850 aaPredicted RBP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 LSM8O95777 96 aaKnown RBP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 RALAP11233 206 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 LAMP2P13473 410 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 DDX6P26196 483 aaKnown RBP eCLIP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 NSFP46459 744 aaKnown RBP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 ADKP55263 362 aaKnown RBP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 YWHAGP61981 247 aaKnown RBP eCLIP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 NHLH1Q02575 133 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 GOLGA8FQ08AF8 430 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 GOLGA8DPQ0D2H9 430 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 MEA1Q16626 185 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 BTBD8Q5XKL5 378 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 TRIM72Q6ZMU5 477 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 HFE2Q6ZVN8 426 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 TMEM150AQ86TG1 271 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 VPS36Q86VN1 386 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 ERICH1Q86X53 443 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 SCUBE3Q8IX30 993 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 SPC24Q8NBT2 197 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 KCTD13Q8WZ19 329 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 OVCA2Q8WZ82 227 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 NDRG1Q92597 394 aaKnown RBP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 FAM149B1Q96BN6 582 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 HSFY1Q96LI6 401 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 ZSWIM3Q96MP5 696 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 SMG9Q9H0W8 520 aaKnown RBP14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 HAUS4Q9H6D7 363 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 TASP1Q9H6P5 420 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 CNGB3Q9NQW8 809 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 LIMD1Q9UGP4 676 aa14.07□□□□□ -0.16
PGGT1B-204ENST00000503638 TMCO5BA8MYB1 307 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 AKR1B15C9JRZ8 316 aaPredicted RBP14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 MOSPD3O75425 235 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 TADA3O75528 432 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 FBXO21O94952 628 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 MBL2P11226 248 aaPredicted RBP14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 CHRNB2P17787 502 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 HDCP19113 662 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 FMO1Q01740 532 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 PDAP1Q13442 181 aaKnown RBP14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 FAM78AQ5JUQ0 283 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 C10orf120Q5SQS8 335 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 HECTD3Q5T447 861 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 E4F1Q66K89 784 aaPredicted RBP14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 OR6B2Q6IFH4 312 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 MTSS1LQ765P7 747 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 CCDC186Q7Z3E2 898 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 IRF2BP2Q7Z5L9 587 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 TADA2BQ86TJ2 420 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 MON1AQ86VX9 555 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 CNGA4Q8IV77 575 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 ARL14EPQ8N8R7 260 aaPredicted RBP14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 OR8K1Q8NGG5 319 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 SLC30A5Q8TAD4 765 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 CLEC4CQ8WTT0 213 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 STK32AQ8WU08 396 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 RNF139Q8WU17 664 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 DDX1Q92499 740 aaKnown RBP14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 SMARCD2Q92925 531 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 CPXM1Q96SM3 734 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 KXD1Q9BQD3 176 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 SLC46A2Q9BY10 475 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 DEF6Q9H4E7 631 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 CCSER2Q9H7U1 834 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 SMPD4Q9NXE4 827 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 CYTH4Q9UIA0 394 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 ZNF318Q5VUA4 2279 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 MYO16Q9Y6X6 1858 aa14.06□□□□□ -0.16
PGGT1B-204ENST00000503638 DOCK6Q96HP0 2047 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 GOLGA8SH3BPF8 625 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 CAPN9O14815 690 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 SART1O43290 800 aaKnown RBP14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 TLR5O60602 858 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 MFAP3LO75121 409 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 SERPING1P05155 500 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 RARGP13631 454 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 VIPR2P41587 438 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 MMS22LQ6ZRQ5 1243 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 ARID3BQ8IVW6 561 aaPredicted RBP14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 YAF2Q8IY57 180 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 CMTM8Q8IZV2 173 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 WDTC1Q8N5D0 677 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 EDEM1Q92611 657 aa14.05□□□□□ -0.16
PGGT1B-204ENST00000503638 SYN2Q92777 582 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms