RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 OTUB2Q96DC9 234 aa11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 ASIC4Q96FT7 647 aa11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 NUP58Q9BVL2 599 aa11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 TRMT61BQ9BVS5 477 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 TTYH3Q9C0H2 523 aa11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 FAM207AQ9NSI2 230 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 AJAP1Q9UKB5 411 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 ITIH6Q6UXX5 1313 aa11.29□□□□□ -0.6
UBE2D3-212ENST00000502563 A0A1W2PQJ5 194 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 PRR33A8MZF0 331 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 M0QYV0 167 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 CYP26A1O43174 497 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 THAP12O43422 761 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 SERPINC1P01008 464 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 ASGR2P07307 311 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 GLI1P08151 1106 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 GJA1P17302 382 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 STAT1P42224 750 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 TKTL1P51854 596 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 POLR2FP61218 127 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 APBA1Q02410 837 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 PRKCQQ04759 706 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 NNTQ13423 1086 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 PPP1R2P3Q6NXS1 205 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 PMF1Q6P1K2 205 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 TRIM72Q6ZMU5 477 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 BHLHA9Q7RTU4 235 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.63e-7■■■□□ 17.8
UBE2D3-212ENST00000502563 SECISBP2LQ93073 1101 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 NOX5Q96PH1 765 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 SPAG5Q96R06 1193 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 FAM83CQ9BQN1 747 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 DDX23Q9BUQ8 820 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 OSBPL6Q9BZF3 934 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 MIS12Q9H081 205 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 NUCKS1Q9H1E3 243 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 ABCC13Q9NSE7 274 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 OLA1Q9NTK5 396 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 ASNSD1Q9NWL6 643 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 THG1LQ9NWX6 298 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 CEP83Q9Y592 693 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 HELZP42694 1942 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 TECTAO75443 2155 aa11.28□□□□□ -0.6
UBE2D3-212ENST00000502563 COL4A2P08572 1712 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 E2F8A0AVK6 867 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 C2orf78A6NCI8 922 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 DPYSL4O14531 572 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 EPHB6O15197 1021 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 TEX33O43247 280 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 COCHO43405 550 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 TLR5O60602 858 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 CKMP06732 381 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 RALAP11233 206 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 KRT9P35527 623 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 ATP5C1P36542 298 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 GABRB2P47870 512 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 NUBP1P53384 320 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 UBASH3AP57075 661 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 STARD6P59095 220 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 DAOAP59103 153 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 PDCLQ13371 301 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 SARM1Q6SZW1 724 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 ARCQ7LC44 396 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 SLC47A2Q86VL8 602 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 SIX6OS1Q8N1H7 587 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 TMEM35BQ8NCS4 154 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 C1orf131Q8NDD1 294 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 OSCP1Q8WVF1 389 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 BAP1Q92560 729 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 SYN2Q92777 582 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 SHDQ96IW2 340 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 RPP25Q9BUL9 199 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 IRX2Q9BZI1 471 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 RNF38Q9H0F5 515 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 AIPL1Q9NZN9 384 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 GMIPQ9P107 970 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 TBC1D14Q9P2M4 693 aa11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 NOCTQ9UK39 431 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-212ENST00000502563 MYO16Q9Y6X6 1858 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 TULP2O00295 520 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 SLC9A3R1O14745 358 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 ZNF263O14978 683 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 CBFA2T2O43439 604 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 CYP1A1P04798 512 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 FERP16591 822 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 VIPR2P41587 438 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 PRKCIP41743 596 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 KLK7P49862 253 aa11.26□□□□□ -0.61
UBE2D3-212ENST00000502563 CDR1P51861 262 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms