RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
COL6A1-206ENST00000498614 ARL4CP56559 192 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 CDK16Q00536 496 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 OCRLQ01968 901 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 TAP1Q03518 808 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 SLC34A1Q06495 639 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 ZC3H12AQ5D1E8 599 aaKnown RBP17.09■□□□□ 0.33
COL6A1-206ENST00000498614 LRRC74BQ6ZQY2 392 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 TSHZ1Q6ZSZ6 1077 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 TTC7BQ86TV6 843 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 FBXO16Q8IX29 292 aaPredicted RBP17.09■□□□□ 0.33
COL6A1-206ENST00000498614 VPS52Q8N1B4 723 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 ZNF784Q8NCA9 323 aaPredicted RBP17.09■□□□□ 0.33
COL6A1-206ENST00000498614 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 MINDY3Q9H8M7 445 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 PTPRHQ9HD43 1115 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
COL6A1-206ENST00000498614 CNMDO75829 334 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 GTF2A2P52657 109 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 CELF3Q5SZQ8 465 aaKnown RBP17.08■□□□□ 0.33
COL6A1-206ENST00000498614 AP1ARQ63HQ0 302 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 PPIL6Q8IXY8 311 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 EMC1Q8N766 993 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 NAT8LQ8N9F0 302 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 MCUR1Q96AQ8 359 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 FGD4Q96M96 766 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 SPATA33Q96N06 139 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 ZIC5Q96T25 663 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 C2CD2Q9Y426 696 aa17.08■□□□□ 0.33
COL6A1-206ENST00000498614 TRPM7Q96QT4 1865 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 ACKR2O00590 384 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 DNAJC6O75061 913 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 LGR5O75473 907 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 CSDE1O75534 798 aaKnown RBP17.08■□□□□ 0.32
COL6A1-206ENST00000498614 TOMM70O94826 608 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 KRT3P12035 628 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 IL1R2P27930 398 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 PTPN7P35236 360 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 BIRC2Q13490 618 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 KLHL38Q2WGJ6 581 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 APLFQ8IW19 511 aaPredicted RBP17.08■□□□□ 0.32
COL6A1-206ENST00000498614 ARFGAP1Q8N6T3 406 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 NIPA2Q8N8Q9 360 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 CFAP61Q8NHU2 1237 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 PPP1R16BQ96T49 567 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 TUBB6Q9BUF5 446 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 SYNCQ9H7C4 482 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 RBPJLQ9UBG7 517 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 BRCA2P51587 3418 aa17.08■□□□□ 0.32
COL6A1-206ENST00000498614 MCM3APO60318 1980 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 C3orf70A6NLC5 250 aaPredicted RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 GAS2O43903 313 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 LPXNO60711 386 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 LRCH4O75427 683 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 SNUPNO95149 360 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 SKIP12755 728 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 BGNP21810 368 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 PSMC1P62191 440 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 SLC25A11Q02978 314 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 BBS9Q3SYG4 887 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 CWF19L1Q69YN2 538 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 EFCAB12Q6NXP0 572 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 ZC3H18Q86VM9 953 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 KIAA0319LQ8IZA0 1049 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 SDCBP2Q9H190 292 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 CDT1Q9H211 546 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 FZD8Q9H461 694 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 STRIP2Q9ULQ0 834 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 MTO1Q9Y2Z2 717 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 B4GALT4O60513 344 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 AP1G2O75843 785 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 TMEM63AO94886 807 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 MT-ND3P03897 115 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 NFICP08651 508 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 ESRRAP11474 423 aaPredicted RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 RPL22P35268 128 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 OTUD4Q01804 1114 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 PRKD1Q15139 912 aaPredicted RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 ZNF667Q5HYK9 610 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 RGMBQ6NW40 437 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 PCGF5Q86SE9 256 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 PALM2Q8IXS6 379 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 ACTL9Q8TC94 416 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 TTC17Q96AE7 1141 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 IFT43Q96FT9 208 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 SERAC1Q96JX3 654 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 FAM111AQ96PZ2 611 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 CPXM1Q96SM3 734 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 VCXQ9H320 206 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 RPF1Q9H9Y2 349 aaKnown RBP17.07■□□□□ 0.32
COL6A1-206ENST00000498614 ARMCX1Q9P291 453 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 HMGXB4Q9UGU5 601 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 SIX4Q9UIU6 781 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 PPME1Q9Y570 386 aa17.07■□□□□ 0.32
COL6A1-206ENST00000498614 EVPLQ92817 2033 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
COL6A1-206ENST00000498614 CD48P09326 243 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms