RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, human

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTN-208	ENST00000498223	GJA1	P17302	382 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	CYP4F8	P98187	520 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	CENPC	Q03188	943 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	CCDC173	Q0VFZ6	552 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	SPA17	Q15506	151 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	C2CD6	Q53TS8	623 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	BTBD8	Q5XKL5	378 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	ALKBH5	Q6P6C2	394 aa	Known RBP	12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	TOGARAM2	Q6ZUX3	1019 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	FAM183BP	Q6ZVS7	135 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	GET4	Q7L5D6	327 aa	Predicted RBP	12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	TMEM110	Q86TL2	294 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	MON1A	Q86VX9	555 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	TMC8	Q8IU68	726 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	CCDC170	Q8IYT3	715 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	GJD3	Q8N144	294 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	SMRP1	Q8NCR6	262 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	FEZF2	Q8TBJ5	459 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	CLEC4C	Q8WTT0	213 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	NDRG1	Q92597	394 aa	Known RBP	12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	TCEAL4	Q96EI5	215 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	MYRFL	Q96LU7	910 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	SYT11	Q9BT88	431 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	NACA2	Q9H009	215 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	S1PR5	Q9H228	398 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	CD320	Q9NPF0	282 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	SPTLC3	Q9NUV7	552 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	TAS2R14	Q9NYV8	317 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	TJP2	Q9UDY2	1190 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	STRIP2	Q9ULQ0	834 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	USP15	Q9Y4E8	981 aa	Predicted RBP	12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	MYO10	Q9HD67	2058 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223	CLUH	O75153	1309 aa		12.02	□□□□□ -0.49
CTTN-208	ENST00000498223		A0A1W2PQH9	124 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	SOWAHD	A6NJG2	315 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	CAPN9	O14815	690 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	PAPSS1	O43252	624 aa	Predicted RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	GABBR2	O75899	941 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	ABCB4	P21439	1286 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	MMP8	P22894	467 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	GBP2	P32456	591 aa	Predicted RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	PPP3CC	P48454	512 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	DAOA	P59103	153 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	RNASE9	P60153	205 aa	Known RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	YWHAG	P61981	247 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	C1QBP	Q07021	282 aa	Known RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	SMAD4	Q13485	552 aa	Known RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	CBX2	Q14781	532 aa	Predicted RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	TEAD2	Q15562	447 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	SLC18A3	Q16572	532 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	EFHC1	Q5JVL4	640 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	GPR158	Q5T848	1215 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	GAREM2	Q75VX8	874 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	RSRC2	Q7L4I2	434 aa	Known RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	DNAAF5	Q86Y56	855 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	PHF13	Q86YI8	300 aa	Predicted RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	MCOLN2	Q8IZK6	566 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	TTC16	Q8NEE8	873 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	CCDC112	Q8NEF3	446 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	RNF139	Q8WU17	664 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	OVCA2	Q8WZ82	227 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	IRGQ	Q8WZA9	623 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.01	□□□□□ -0.49	3e-12	■■■■□ 21.9
CTTN-208	ENST00000498223	ZNF653	Q96CK0	615 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	TRIM11	Q96F44	468 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	NECTIN4	Q96NY8	510 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	SELENOO	Q9BVL4	669 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	WDR6	Q9NNW5	1121 aa	Known RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	LUC7L	Q9NQ29	371 aa	Known RBP	12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	IL37	Q9NZH6	218 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	WDR35	Q9P2L0	1181 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	MYO1A	Q9UBC5	1043 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	USP3	Q9Y6I4	520 aa		12.01	□□□□□ -0.49
CTTN-208	ENST00000498223	ANKRD62	A6NC57	917 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	PI4K2B	G5E9Z4	385 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	MBTPS2	O43462	519 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	GRAP2	O75791	330 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	LTF	P02788	710 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	F11	P03951	625 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	H2AFZ	P0C0S5	128 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	RARG	P13631	454 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	SP100	P23497	879 aa	Predicted RBP	12	□□□□□ -0.49
CTTN-208	ENST00000498223	CCR2	P41597	374 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	GABRB2	P47870	512 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	PSEN1	P49768	467 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	EPHA5	P54756	1037 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	SLC6A3	Q01959	620 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	ZNF268	Q14587	947 aa	Predicted RBP	12	□□□□□ -0.49
CTTN-208	ENST00000498223	SLC5A9	Q2M3M2	681 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	TMEM31	Q5JXX7	168 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	C10orf120	Q5SQS8	335 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	HECTD3	Q5T447	861 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	PM20D1	Q6GTS8	502 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	DNAJC24	Q6P3W2	148 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	H2AFV	Q71UI9	128 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	MON1B	Q7L1V2	547 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	XYLT1	Q86Y38	959 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	ZDHHC17	Q8IUH5	632 aa		12	□□□□□ -0.49
CTTN-208	ENST00000498223	LRRC8A	Q8IWT6	810 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms