RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 P2RX7Q99572 595 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 C20orf96Q9NUD7 363 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 DDX43Q9NXZ2 648 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZNF536O15090 1300 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 DYTNA2CJ06 578 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 F5H6K3 240 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 MCF2LO15068 1137 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 EIF3DO15371 548 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 ITM2AO43736 263 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 CSDE1O75534 798 aaKnown RBP11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 HSPA4LO95757 839 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 CYP3A4P08684 503 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 MCF2P10911 925 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 PSMA2P25787 234 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 KLRC2P26717 231 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 GTF2H1P32780 548 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 PERM1Q5SV97 790 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 HYIQ5T013 277 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 C1orf186Q6ZWK4 172 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 SV2AQ7L0J3 742 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 UNC45BQ8IWX7 931 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 ALLCQ8N6M5 410 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 EMC1Q8N766 993 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 KCTD6Q8NC69 237 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 DDHD1Q8NEL9 900 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 SPATA7Q9P0W8 599 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 SLC9A2Q9UBY0 812 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 SNX13Q9Y5W8 968 aa11.01□□□□□ -0.65
TRAPPC12-223ENST00000497597 STIP1P31948 543 aaKnown RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 DSG3P32926 999 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ACOT2P49753 483 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 FSTL1Q12841 308 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ITGADQ13349 1161 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 SPDYAQ5MJ70 313 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 RNASEH2BQ5TBB1 312 aaKnown RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 UGT2A3Q6UWM9 527 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CYP2R1Q6VVX0 501 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 PHTF2Q8N3S3 785 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 BHLHE22Q8NFJ8 381 aaPredicted RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CPT1BQ92523 772 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 NCSTNQ92542 709 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 FAM20AQ96MK3 541 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CORO1BQ9BR76 489 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 NYXQ9GZU5 481 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 SLC17A6Q9P2U8 582 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 HBS1LQ9Y450 684 aaKnown RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 C1orf232A0A0U1RR37 186 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZBBXA8MT70 800 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 STX16-NPEPL1H3BU86 382 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZBTB11O95625 1053 aaPredicted RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 LDHAP00338 332 aaKnown RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 PCYT1AP49585 367 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 NPNTQ6UXI9 565 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZC3H3Q8IXZ2 948 aaKnown RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 SMYD1Q8NB12 490 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 LMO3Q8TAP4 145 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 FNDC8Q8TC99 324 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 SHC3Q92529 594 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ATP2A3Q93084 1043 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 MOCOSQ96EN8 888 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 KCNK16Q96T55 309 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 HAUS8Q9BT25 410 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 FOXP3Q9BZS1 431 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 KLHL25Q9H0H3 589 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 PCDH18Q9HCL0 1135 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 EURLQ9NYK6 297 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 STRIP2Q9ULQ0 834 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 SHOC2Q9UQ13 582 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 COQ6Q9Y2Z9 468 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 GMEB1Q9Y692 573 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ALS2Q96Q42 1657 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CROCCQ5TZA2 2017 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CNTNAP2Q9UHC6 1331 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 DNAJA2O60884 412 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 RFX1P22670 979 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 NR4A1P22736 598 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 HOXD12P35452 270 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 NR1H2P55055 460 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 C21orf59P57076 290 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZNF568Q3ZCX4 644 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CEP55Q53EZ4 464 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 FRMD7Q6ZUT3 714 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 SNX32Q86XE0 403 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 EXD1Q8NHP7 514 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 SPATA18Q8TC71 538 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 DCAKDQ8WVC6 231 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZFRQ96KR1 1074 aaKnown RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 MRPL46Q9H2W6 279 aaKnown RBP11□□□□□ -0.65
TRAPPC12-223ENST00000497597 GPAMQ9HCL2 828 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CIDEBQ9UHD4 219 aa11□□□□□ -0.65
TRAPPC12-223ENST00000497597 CCDC78A2IDD5 438 aa10.99□□□□□ -0.65
TRAPPC12-223ENST00000497597 CXorf49A8MYA2 514 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC12-223ENST00000497597 MEIS2O14770 477 aa10.99□□□□□ -0.65
TRAPPC12-223ENST00000497597 ATP9BO43861 1147 aa10.99□□□□□ -0.65
TRAPPC12-223ENST00000497597 KRT38O76015 456 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms