RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PSMD5Q16401 504 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 FAM102AQ5T9C2 384 aaPredicted RBP14.89□□□□□ -0.03
VPS26A-209ENST00000497564 SLC26A9Q7LBE3 791 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 MRPL43Q8N983 215 aaKnown RBP14.89□□□□□ -0.03
VPS26A-209ENST00000497564 SPPL2BQ8TCT7 592 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 PPP2R3CQ969Q6 453 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 BTBD6Q96KE9 485 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 TRIM7Q9C029 511 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 LRRC4Q9HBW1 653 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 NGRNQ9NPE2 291 aaKnown RBP14.89□□□□□ -0.03
VPS26A-209ENST00000497564 METTL5Q9NRN9 209 aaKnown RBP14.89□□□□□ -0.03
VPS26A-209ENST00000497564 ASNSD1Q9NWL6 643 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 CDC23Q9UJX2 597 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 PCDHB5Q9Y5E4 795 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 MRFAP1Q9Y605 127 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 OBSL1O75147 1896 aa14.89□□□□□ -0.03
VPS26A-209ENST00000497564 ANAPC1Q9H1A4 1944 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 TNFRSF10AO00220 468 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 GJB6O95452 261 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 CXCL14O95715 111 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 GLI1P08151 1106 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 OR4Q2P0C623 313 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 COMTP21964 271 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 CTNNA2P26232 953 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 CA8P35219 290 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 RFC1P35251 1148 aaPredicted RBP14.88□□□□□ -0.03
VPS26A-209ENST00000497564 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 ZNF252P-AS1Q0IIN9 211 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 ADIGQ0VDE8 80 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 SMC1AQ14683 1233 aaKnown RBP14.88□□□□□ -0.03
VPS26A-209ENST00000497564 ACAP1Q15027 740 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 EFHC1Q5JVL4 640 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 PDE12Q6L8Q7 609 aaKnown RBP14.88□□□□□ -0.03
VPS26A-209ENST00000497564 PRSS55Q6UWB4 352 aaPredicted RBP14.88□□□□□ -0.03
VPS26A-209ENST00000497564 RSPO2Q6UXX9 243 aaPredicted RBP14.88□□□□□ -0.03
VPS26A-209ENST00000497564 JOSD2Q8TAC2 188 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 RIN2Q8WYP3 895 aaPredicted RBP14.88□□□□□ -0.03
VPS26A-209ENST00000497564 KHSRPQ92945 711 aaKnown RBP eCLIP14.88□□□□□ -0.034e-10■□□□□ 10
VPS26A-209ENST00000497564 C8orf48Q96LL4 319 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 OSBPL9Q96SU4 736 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 KCNK16Q96T55 309 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 RHOBTB2Q9BYZ6 727 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 CNGB3Q9NQW8 809 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 HSFX1Q9UBD0 423 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 CDH22Q9UJ99 828 aa14.88□□□□□ -0.03
VPS26A-209ENST00000497564 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CCDC66A2RUB6 948 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 MTMR11A4FU01 709 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 C2CD4BA6NLJ0 364 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 TMEM110-MUSTN1A8MSY1 372 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 DPYSL4O14531 572 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 TRIM66O15016 1216 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 DDX3YO15523 660 aaKnown RBP14.87□□□□□ -0.03
VPS26A-209ENST00000497564 SART1O43290 800 aaKnown RBP14.87□□□□□ -0.03
VPS26A-209ENST00000497564 MBTPS2O43462 519 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 URODP06132 367 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CTSAP10619 480 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 LCP1P13796 627 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CPB1P15086 417 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CTNNA1P35221 906 aaKnown RBP14.87□□□□□ -0.03
VPS26A-209ENST00000497564 TKTL1P51854 596 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 OGDHQ02218 1023 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CREMQ03060 361 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 KIAA1841Q6NSI8 718 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 SCUBE3Q8IX30 993 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 SIX6OS1Q8N1H7 587 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 IRGQQ8WZA9 623 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 PIWIL1Q96J94 861 aaKnown RBP14.87□□□□□ -0.03
VPS26A-209ENST00000497564 PBKQ96KB5 322 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CEP295NLQ96MC4 621 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 APOL5Q9BWW9 433 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CD207Q9UJ71 328 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 SSX2IPQ9Y2D8 614 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 CDY1Q9Y6F8 540 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 USP3Q9Y6I4 520 aa14.87□□□□□ -0.03
VPS26A-209ENST00000497564 F8VP50 259 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 PIK3R2O00459 728 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 TNFRSF10BO14763 440 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 SPOPO43791 374 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 LILRB3O75022 631 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 HSF2BPO75031 334 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 CLASP2O75122 1294 aaKnown RBP14.86□□□□□ -0.03
VPS26A-209ENST00000497564 VNN2O95498 520 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 GPD1P21695 349 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 CYP2F1P24903 491 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 ZNF143P52747 638 aaPredicted RBP14.86□□□□□ -0.03
VPS26A-209ENST00000497564 DAOAP59103 153 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 ROR1Q01973 937 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 WHAMMP3Q1A5X7 153 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 TPGS2Q68CL5 300 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 PM20D1Q6GTS8 502 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 GPRIN1Q7Z2K8 1008 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 UBL4BQ8N7F7 174 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 SMRP1Q8NCR6 262 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 NCAPGQ9BPX3 1015 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 CLSTN3Q9BQT9 956 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 CNPY3Q9BT09 278 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 CARD9Q9H257 536 aa14.86□□□□□ -0.03
VPS26A-209ENST00000497564 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS26A-209ENST00000497564 ABI2Q9NYB9 513 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms