RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TMEM59LQ9UK28 342 aa20.72■□□□□ 0.91
SCAMP3-209ENST00000497470 RFPL2O75678 378 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 CCDC175P0C221 793 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 WEE1P30291 646 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 GTF2F1P35269 517 aaKnown RBP eCLIP20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 TAF10Q12962 218 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 MTF1Q14872 753 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 ACAP1Q15027 740 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 CYP4A22Q5TCH4 519 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 STKLD1Q8NE28 680 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 GIPC2Q8TF65 315 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 KHSRPQ92945 711 aaKnown RBP eCLIP20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 NCAPGQ9BPX3 1015 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 TSGA10Q9BZW7 698 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 IGFLR1Q9H665 355 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 POPDC2Q9HBU9 364 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 OLA1Q9NTK5 396 aaKnown RBP20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 TRPM5Q9NZQ8 1165 aa20.71■□□□□ 0.91
SCAMP3-209ENST00000497470 ZNF840PA6NDX5 716 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 CSPG5O95196 566 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 LTFP02788 710 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 USP17L7P0C7H9 530 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 LCP1P13796 627 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 FOSL2P15408 326 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 LTBRP36941 435 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 MTHFRP42898 656 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 USP46P62068 366 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 MAMLD1Q13495 774 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 SDHAF4Q5VUM1 108 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 OR6B2Q6IFH4 312 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 CES5AQ6NT32 575 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 LLGL2Q6P1M3 1020 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 FAM183BPQ6ZVS7 135 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 MYLIPQ8WY64 445 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 RFFLQ8WZ73 363 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 SMG7Q92540 1137 aaKnown RBP20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 NT5C3BQ969T7 300 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 ZNF653Q96CK0 615 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 RIPOR3Q96MK2 946 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 NECTIN4Q96NY8 510 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 SLC2A13Q96QE2 648 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 DNMT3BQ9UBC3 853 aaKnown RBP20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 CNOT8Q9UFF9 292 aaKnown RBP20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 COG5Q9UP83 839 aa20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 REXO2Q9Y3B8 237 aaKnown RBP20.7■□□□□ 0.9
SCAMP3-209ENST00000497470 SPDYE4A6NLX3 237 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 TMCO5BA8MYB1 307 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 CCL16O15467 120 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 CCP110O43303 1012 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 RHOP08100 348 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 RALAP11233 206 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 KRT3P12035 628 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 RRM1P23921 792 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 NOS2P35228 1153 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 YWHAGP61981 247 aaKnown RBP eCLIP20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 NNTQ13423 1086 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 MTMR3Q13615 1198 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 ATAT1Q5SQI0 421 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 BSPRYQ5W0U4 402 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 MSANTD2Q6P1R3 559 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 DNAJC24Q6P3W2 148 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 SCD5Q86SK9 330 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 KIAA1958Q8N8K9 716 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 PGAP3Q96FM1 320 aaPredicted RBP20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 FAM161BQ96MY7 647 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 GCNAQ96QF7 691 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 THAP2Q9H0W7 228 aa20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
SCAMP3-209ENST00000497470 ZNF638Q14966 1978 aaKnown RBP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 YJEFN3A6XGL0 299 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 E7ENQ6 273 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 ZSCAN12O43309 604 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 TBX10O75333 385 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 DAB1O75553 588 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 OLFM2O95897 454 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 MATKP42679 507 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 PTPN9P43378 593 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 KIF5AQ12840 1032 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 MTA1Q13330 715 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 PRSS36Q5K4E3 855 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 FAM102AQ5T9C2 384 aaPredicted RBP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 PDZD4Q76G19 769 aaPredicted RBP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 TMEM150AQ86TG1 271 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 RNF10Q8N5U6 811 aaKnown RBP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 SMRP1Q8NCR6 262 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 FEZF2Q8TBJ5 459 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 MRPS31Q92665 395 aaKnown RBP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 DDX23Q9BUQ8 820 aaKnown RBP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 SELENOOQ9BVL4 669 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 PIDD1Q9HB75 910 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 CLDND1Q9NY35 253 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 TJP2Q9UDY2 1190 aa20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 ZFP37Q9Y6Q3 630 aaPredicted RBP20.68■□□□□ 0.9
SCAMP3-209ENST00000497470 GOLGA6L9A6NEM1 432 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 TMEM191CA6NGB0 347 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 DPYSL4O14531 572 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 LINC01565O15544 149 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 KRT86O43790 486 aa20.67■□□□□ 0.9
SCAMP3-209ENST00000497470 DESP17661 470 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms