RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MRPS17Q9Y2R5 130 aaKnown RBP4.71□□□□□ -1.66
SMC4-225ENST00000497203 AQP12BA6NM10 295 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 ACKR2O00590 384 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 NUDT3O95989 172 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 NPPBP16860 134 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 EPHA3P29320 983 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 PTH2RP49190 550 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 RENBPP51606 427 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 BCAT1P54687 386 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 PPFIA1Q13136 1202 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 HNRNPA0Q13151 305 aaKnown RBP4.7□□□□□ -1.66
SMC4-225ENST00000497203 KCNAB1Q14722 419 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 MANEALQ5VSG8 457 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 USP49Q70CQ1 688 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 ANKRD18AQ8IVF6 992 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMC4-225ENST00000497203 SIMC1Q8NDZ2 872 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 DNAJB14Q8TBM8 379 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 TFAP2BQ92481 460 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 SLC9A6Q92581 669 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 FBXL20Q96IG2 436 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 PDLIM2Q96JY6 352 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.7□□□□□ -1.66
SMC4-225ENST00000497203 IGSF9Q9P2J2 1179 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 LRIT1Q9P2V4 623 aa4.7□□□□□ -1.66
SMC4-225ENST00000497203 ZAR1LA6NP61 321 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 VWC2LB2RUY7 222 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 ADM5C9JUS6 153 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 IRAK2O43187 625 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 SNX2O60749 519 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 VIPP01282 170 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 CSF1RP07333 972 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 RHOP08100 348 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 CHRM2P08172 466 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 ITGA2BP08514 1039 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 MST1P26927 711 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 RARRES1P49788 294 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 MTHFSP49914 203 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 PGDP52209 483 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 NXPH1P58417 271 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 ITIH3Q06033 890 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 GPS1Q13098 491 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 TRIM71Q2Q1W2 868 aaKnown RBP4.69□□□□□ -1.66
SMC4-225ENST00000497203 TMTC4Q5T4D3 741 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 TEDDM1Q5T9Z0 273 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 VPS53Q5VIR6 699 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 RAP1GAP2Q684P5 730 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 TANGO2Q6ICL3 276 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 TTC30AQ86WT1 665 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 GALNT15Q8N3T1 639 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 B3GALNT2Q8NCR0 500 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 ABHD5Q8WTS1 349 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 STYXQ8WUJ0 223 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 OSCP1Q8WVF1 389 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 ATRIPQ8WXE1 791 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 GCC1Q96CN9 775 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 GRAMD1AQ96CP6 724 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 KATNAL1Q9BW62 490 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 TPSD1Q9BZJ3 242 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 INO80BQ9C086 356 aaPredicted RBP4.69□□□□□ -1.66
SMC4-225ENST00000497203 AMBRA1Q9C0C7 1298 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 RIOX1Q9H6W3 641 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 GBA2Q9HCG7 927 aaPredicted RBP4.69□□□□□ -1.66
SMC4-225ENST00000497203 GRHPRQ9UBQ7 328 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 HERC5Q9UII4 1024 aaKnown RBP4.69□□□□□ -1.66
SMC4-225ENST00000497203 SERTAD3Q9UJW9 196 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 GTF2A1LQ9UNN4 478 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 SSX2IPQ9Y2D8 614 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 DTNAQ9Y4J8 743 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 PCDHGB3Q9Y5G1 929 aa4.69□□□□□ -1.66
SMC4-225ENST00000497203 WDR27A2RRH5 827 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 OR2W5A6NFC9 320 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 TRIM38O00635 465 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 MPPED1O15442 326 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 DHRS4L1P0CG22 281 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 PECAM1P16284 738 aaPredicted RBP4.68□□□□□ -1.66
SMC4-225ENST00000497203 GATMP50440 423 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 ALDH18A1P54886 795 aaKnown RBP4.68□□□□□ -1.66
SMC4-225ENST00000497203 ARL4CP56559 192 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 NANOS3P60323 173 aaKnown RBP4.68□□□□□ -1.66
SMC4-225ENST00000497203 POU5F1BQ06416 359 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 ATP1A4Q13733 1029 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 PTPRRQ15256 657 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 TXNRD1Q16881 649 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 ERCC6LQ2NKX8 1250 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 PTCHD3Q3KNS1 767 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 ARHGAP15Q53QZ3 475 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 ZNF362Q5T0B9 420 aaPredicted RBP4.68□□□□□ -1.66
SMC4-225ENST00000497203 KAZNQ674X7 775 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 PEG10Q86TG7 708 aaKnown RBP4.68□□□□□ -1.66
SMC4-225ENST00000497203 ZNF575Q86XF7 245 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 RASGRP3Q8IV61 690 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 DNAJC10Q8IXB1 793 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 ABRAQ8N0Z2 381 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 MBD3L2Q8NHZ7 208 aaPredicted RBP4.68□□□□□ -1.66
SMC4-225ENST00000497203 TMEM171Q8WVE6 324 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 RSC1A1Q92681 617 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 TBC1D20Q96BZ9 403 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 PGBD1Q96JS3 809 aa4.68□□□□□ -1.66
SMC4-225ENST00000497203 HIST1H2AAQ96QV6 131 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms