RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 STXBP5Q5T5C0 1151 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 SNX30Q5VWJ9 437 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 TXNDC8Q6A555 127 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 OR6B2Q6IFH4 312 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 TADA2BQ86TJ2 420 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 ZDHHC17Q8IUH5 632 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 ADHFE1Q8IWW8 467 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 MAB21L3Q8N8X9 362 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 C18orf8Q96DM3 657 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 CDK5RAP1Q96SZ6 601 aaKnown RBP16.63■□□□□ 0.25
PMF1-205ENST00000497069 NACA2Q9H009 215 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 CLIC5Q9NZA1 410 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 C2orf16Q68DN1 1984 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 COL6A3P12111 3177 aa16.63■□□□□ 0.25
PMF1-205ENST00000497069 C2CD4DB7Z1M9 353 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 PAPSS1O43252 624 aaPredicted RBP16.62■□□□□ 0.25
PMF1-205ENST00000497069 GABBR2O75899 941 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 CKMP06732 381 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 ZDHHC11BP0C7U3 371 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 UNGP13051 313 aaPredicted RBP16.62■□□□□ 0.25
PMF1-205ENST00000497069 LAMP2P13473 410 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 RARGP13631 454 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 CENPCQ03188 943 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 BTBD8Q5XKL5 378 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 ACAD10Q6JQN1 1059 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 TOGARAM2Q6ZUX3 1019 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 SLC30A5Q8TAD4 765 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 ZSCAN18Q8TBC5 510 aaPredicted RBP16.62■□□□□ 0.25
PMF1-205ENST00000497069 RNF139Q8WU17 664 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 NDRG1Q92597 394 aaKnown RBP16.62■□□□□ 0.25
PMF1-205ENST00000497069 FAM149B1Q96BN6 582 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 SYT11Q9BT88 431 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 TRIM62Q9BVG3 475 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 SLC46A2Q9BY10 475 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 ABCC13Q9NSE7 274 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 ADAM22Q9P0K1 906 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 ARHGAP20Q9P2F6 1191 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 STRIP2Q9ULQ0 834 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 MYH10P35580 1976 aa16.62■□□□□ 0.25
PMF1-205ENST00000497069 PATJQ8NI35 1801 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 PRUNE2Q8WUY3 3088 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 C2orf78A6NCI8 922 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 YJEFN3A6XGL0 299 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 TMCO5BA8MYB1 307 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 E7ENQ6 273 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 NRG2O14511 850 aaPredicted RBP16.61■□□□□ 0.25
PMF1-205ENST00000497069 DPYSL4O14531 572 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 TLR5O60602 858 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 LTFP02788 710 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 ERBB2P04626 1255 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 CALB1P05937 261 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 PLEKP08567 350 aaPredicted RBP16.61■□□□□ 0.25
PMF1-205ENST00000497069 BMP1P13497 986 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 HDCP19113 662 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 MMP8P22894 467 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 EIF4A3P38919 411 aaKnown RBP16.61■□□□□ 0.25
PMF1-205ENST00000497069 GABRB2P47870 512 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 TUBP50607 506 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 TJAP1Q5JTD0 557 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 EFHC1Q5JVL4 640 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 BSPRYQ5W0U4 402 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 WDR59Q6PJI9 974 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 MMS22LQ6ZRQ5 1243 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 FAM183BPQ6ZVS7 135 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 MTSS1LQ765P7 747 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 RSRC2Q7L4I2 434 aaKnown RBP16.61■□□□□ 0.25
PMF1-205ENST00000497069 SCD5Q86SK9 330 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 ZDHHC14Q8IZN3 488 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 CMTM8Q8IZV2 173 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 CLEC4CQ8WTT0 213 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 SMARCD2Q92925 531 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 CCDC42Q96M95 316 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 ZSWIM3Q96MP5 696 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 PANX2Q96RD6 677 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 C11orf70Q9BRQ4 267 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 NMUR1Q9HB89 426 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.61■□□□□ 0.25
PMF1-205ENST00000497069 EPS15L1Q9UBC2 864 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 TJP2Q9UDY2 1190 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 ADAMTS1Q9UHI8 967 aa16.61■□□□□ 0.25
PMF1-205ENST00000497069 SSU72P8A0A1W2PR75 194 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.25
PMF1-205ENST00000497069 CAPN9O14815 690 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 RTN2O75298 545 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 GZMAP12544 262 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 ATP5C1P36542 298 aaKnown RBP16.6■□□□□ 0.25
PMF1-205ENST00000497069 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
PMF1-205ENST00000497069 FAM78AQ5JUQ0 283 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 C10orf120Q5SQS8 335 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 PHF13Q86YI8 300 aaPredicted RBP16.6■□□□□ 0.25
PMF1-205ENST00000497069 ARID3BQ8IVW6 561 aaPredicted RBP16.6■□□□□ 0.25
PMF1-205ENST00000497069 ARL14EPQ8N8R7 260 aaPredicted RBP16.6■□□□□ 0.25
PMF1-205ENST00000497069 ASB16Q96NS5 453 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 CYP2S1Q96SQ9 504 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 CCSER2Q9H7U1 834 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 OLA1Q9NTK5 396 aaKnown RBP16.6■□□□□ 0.25
PMF1-205ENST00000497069 OSER1Q9NX31 292 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 WDR35Q9P2L0 1181 aa16.6■□□□□ 0.25
PMF1-205ENST00000497069 LOC730098B7Z3J9 87 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms