RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SLC51BQ86UW2 128 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC33Q8N5R6 958 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 C7orf31Q8N865 590 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CEP112Q8N8E3 955 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PLEKHO2Q8TD55 490 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 OSCP1Q8WVF1 389 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 C11orf24Q96F05 449 aaPredicted RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC47A1Q96FL8 570 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PGBD1Q96JS3 809 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC138Q96M89 665 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR24Q96S15 920 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SECISBP2Q96T21 854 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 HAUS8Q9BT25 410 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 KIFC3Q9BVG8 833 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NYXQ9GZU5 481 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 TPK1Q9H3S4 243 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RAD21L1Q9H4I0 556 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 HAUS4Q9H6D7 363 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NTN4Q9HB63 628 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PDLIM7Q9NR12 457 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 GLRX2Q9NS18 164 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 USP40Q9NVE5 1235 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 INTS10Q9NVR2 710 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ANO10Q9NW15 660 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MYO1AQ9UBC5 1043 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CRNNQ9UBG3 495 aaPredicted RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 DPP7Q9UHL4 492 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ANAPC5Q9UJX4 755 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 GPR34Q9UPC5 381 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC12A7Q9Y666 1083 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MROH5Q6ZUA9 1318 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 TTC21BQ7Z4L5 1316 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MTUS2Q5JR59 1369 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A1W2PQ45 241 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A1W2PQY0 241 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 MAGEB16A2A368 324 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 LRRIQ4A6NIV6 560 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SNTNA6NMZ2 147 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 GCOM1H8Y6P7 765 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 KPNA5O15131 536 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SMIM24O75264 130 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 FLOT1O75955 427 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SEC31AO94979 1220 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ALDH2P05091 517 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM153BP0C7A2 387 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 MYZAPP0CAP1 466 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 POLR2MP0CAP2 368 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CALM1P0DP23 149 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CALM2P0DP24 149 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CALM3P0DP25 149 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ACTN1P12814 892 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ALADP13716 330 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 EEF1GP26641 437 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PPARGP37231 505 aaPredicted RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 NOP14P78316 857 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 JAG1P78504 1218 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 TFAP4Q01664 338 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 OTUD4Q01804 1114 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CHRNEQ04844 493 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 AIMP1Q12904 312 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 COTL1Q14019 142 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 GBX1Q14549 363 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SMAD1Q15797 465 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 GPR158Q5T848 1215 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 RANBP10Q6VN20 620 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 BRINP3Q76B58 766 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PHLDB2Q86SQ0 1253 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 C12orf56Q8IXR9 622 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 LZTR1Q8N653 840 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 C2orf69Q8N8R5 385 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC112Q8NEF3 446 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 DQX1Q8TE96 717 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 UBXN10Q96LJ8 280 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CEP19Q96LK0 163 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CAMKK2Q96RR4 588 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 MPHOSPH9Q99550 1183 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PHF20Q9BVI0 1012 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 UBXN6Q9BZV1 441 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CDIP1Q9H305 208 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 UCK1Q9HA47 277 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA2P5Q9HBQ8 144 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 C12orf4Q9NQ89 552 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 KCND1Q9NSA2 647 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CDC23Q9UJX2 597 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 WASF3Q9UPY6 502 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 MAPRE3Q9UPY8 281 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CBY1Q9Y3M2 126 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PCDHA8Q9Y5H6 950 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PPIP5K1Q6PFW1 1433 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 C1orf232A0A0U1RR37 186 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC9B1P1A6NJY1 282 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 AREL1O15033 823 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 ZSCAN12O43309 604 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 NUAK1O60285 661 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CTNND1O60716 968 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 LCA5LO95447 670 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 PLA2G1BP04054 148 aaKnown RBP3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP3A4P08684 503 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 GLI4P10075 376 aa3.26□□□□□ -1.89
SNRNP48-202ENST00000496946 NAGAP17050 411 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms