RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TRPV1Q8NER1 839 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SPATA4Q8NEY3 305 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 IRF7Q92985 503 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 KCNH6Q9H252 994 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 MRPL46Q9H2W6 279 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 PIF1Q9H611 641 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 PTPRHQ9HD43 1115 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 FANCFQ9NPI8 374 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 C1orf112Q9NSG2 853 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SEPT10Q9P0V9 454 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 EVLQ9UI08 416 aaPredicted RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 CPSF3Q9UKF6 684 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 POLIQ9UNA4 740 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 LZTS1Q9Y250 596 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 DYRK1BQ9Y463 629 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 TTLL3Q9Y4R7 772 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SQORQ9Y6N5 450 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 O00370 1275 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 OGTO15294 1046 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 HOXC6P09630 235 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 STAG3L1P0CL83 205 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SMIM10L2AP0DMW4 78 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SMIM10L2BP0DMW5 78 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 ITGA4P13612 1032 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 FLT3LGP49771 235 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 EFNA5P52803 228 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 PPIDQ08752 370 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 MESDQ14696 234 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 KIF22Q14807 665 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 WDR72Q3MJ13 1102 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 ARSJQ5FYB0 599 aaPredicted RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 WDR44Q5JSH3 913 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 GNASQ5JWF2 1037 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SYCP2LQ5T4T6 812 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SLFN12LQ6IEE8 588 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 GRAMD2AQ8IUY3 354 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 ANKMY2Q8IV38 441 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 TTC39CQ8N584 583 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 TMEM174Q8WUU8 243 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SCG3Q8WXD2 468 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 DDX1Q92499 740 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 TRIB2Q92519 343 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 KRT35Q92764 455 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 NAP1L3Q99457 506 aaPredicted RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 ZSWIM1Q9BR11 485 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 EIF2AQ9BY44 585 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 UBXN6Q9BZV1 441 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 FAM107BQ9H098 131 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 KLK14Q9P0G3 267 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 CTTNBP2NLQ9P2B4 639 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 NENFQ9UMX5 172 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 DAAM1Q9Y4D1 1078 aa6.47□□□□□ -1.37
SSBP1-213ENST00000496622 ZNFX1Q9P2E3 1918 aaKnown RBP6.47□□□□□ -1.37
SSBP1-213ENST00000496622 GOLGA6L10A0A0M3HER8 536 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 SLC15A5A6NIM6 579 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 MEIS3P2A8K0S8 358 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 LACTBL1A8MY62 500 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 PIK3R2O00459 728 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 MAPK13O15264 365 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 HCRTO43612 131 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 KCNJ13O60928 360 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 N4BP1O75113 896 aaKnown RBP6.46□□□□□ -1.37
SSBP1-213ENST00000496622 KATNA1O75449 491 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 INMTO95050 263 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 PIGRP01833 764 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 SLC26A2P50443 739 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 AFF1P51825 1210 aaKnown RBP6.46□□□□□ -1.37
SSBP1-213ENST00000496622 SNRPFP62306 86 aaKnown RBP6.46□□□□□ -1.37
SSBP1-213ENST00000496622 PRKCZQ05513 592 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 MCL1Q07820 350 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 ZBTB17Q13105 803 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 GRIN2CQ14957 1233 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 MEI1Q5TIA1 1274 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 JADE1Q6IE81 842 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 MPZL3Q6UWV2 235 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 ZPBP2Q6X784 338 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 PEX26Q7Z412 305 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 C11orf74Q86VG3 221 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 BRSK2Q8IWQ3 736 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 KLHL7Q8IXQ5 586 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 CEP112Q8N8E3 955 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 ZBTB8BQ8NAP8 495 aaPredicted RBP6.46□□□□□ -1.37
SSBP1-213ENST00000496622 ALG3Q92685 438 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 WNT8BQ93098 351 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 CNTNAP3BQ96NU0 1288 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 CNTNAP3Q9BZ76 1288 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 PDZD7Q9H5P4 517 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 PCDH18Q9HCL0 1135 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 ABCB6Q9NP58 842 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 TJP2Q9UDY2 1190 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 STK39Q9UEW8 545 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 HMGXB4Q9UGU5 601 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 KIAA1257Q9ULG3 409 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 NOVA2Q9UNW9 492 aaKnown RBP6.46□□□□□ -1.37
SSBP1-213ENST00000496622 PCDHB4Q9Y5E5 795 aa6.46□□□□□ -1.37
SSBP1-213ENST00000496622 MANSC4A6NHS7 340 aaPredicted RBP6.46□□□□□ -1.38
SSBP1-213ENST00000496622 H0YCG3 227 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 PPEF2O14830 753 aa6.46□□□□□ -1.38
SSBP1-213ENST00000496622 TEX28O15482 410 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms