RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 NHLH1Q02575 133 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 BST2Q10589 180 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 KCNMA1Q12791 1236 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 PDGFRLQ15198 375 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 CNGA2Q16280 664 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 RALGPS2Q86X27 583 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 KIAA1958Q8N8K9 716 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 MSANTD3Q96H12 275 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 NELL2Q99435 816 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 PRRX2Q99811 253 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 HSD3B7Q9H2F3 369 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 ACP6Q9NPH0 428 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 TLR8Q9NR97 1041 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 ANO10Q9NW15 660 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 DUS2Q9NX74 493 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 APEX2Q9UBZ4 518 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 NDRG2Q9UN36 371 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 MYO15AQ9UKN7 3530 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 DMDP11532 3685 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 SCAMP3O14828 347 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 TLR5O60602 858 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 CHRNB1P11230 501 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 EEF1GP26641 437 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 RPS9P46781 194 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 NCAPHQ15003 741 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 STX1AQ16623 288 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 GAB4Q2WGN9 574 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 NAIF1Q69YI7 327 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 PM20D1Q6GTS8 502 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 CC2D1AQ6P1N0 951 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 SASS6Q6UVJ0 657 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 MAML2Q8IZL2 1156 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 ZNF276Q8N554 614 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 TTC16Q8NEE8 873 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 SLC35F5Q8WV83 523 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 SHC3Q92529 594 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 NDRG1Q92597 394 aaKnown RBP16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 ECT2Q9H8V3 914 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 FANCLQ9NW38 375 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 CFAP97Q9P2B7 532 aa16.98■□□□□ 0.31
DNMT3A-215ENST00000496570 H0Y858 1186 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 RARGP13631 454 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 TKTL1P51854 596 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 PTPN5P54829 565 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 TYRO3Q06418 890 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 PMF1Q6P1K2 205 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 ENOSF1Q7L5Y1 443 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 KCTD13Q8WZ19 329 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 SECISBP2LQ93073 1101 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 KLF16Q9BXK1 252 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 TAB2Q9NYJ8 693 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 HESX1Q9UBX0 185 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 NUDT5Q9UKK9 219 aa16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 MRPS17Q9Y2R5 130 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-215ENST00000496570 MDM4O15151 490 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 SETSIPP0DME0 302 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 KRT5P13647 590 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 ZNF18P17022 549 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 GJA4P35212 333 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 PLA2G5P39877 138 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 IFNAR2P48551 515 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 RPL34P49207 117 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 MFAP3P55082 362 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 GAS6Q14393 721 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 PON2Q15165 354 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 KRT31Q15323 416 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 ANGPT1Q15389 498 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 CAVIN1Q6NZI2 390 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 KLHDC10Q6PID8 442 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 ADGRG2Q8IZP9 1017 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 PHOX2BQ99453 314 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 ULBP1Q9BZM6 244 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 FBRSL1Q9HCM7 1045 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 RBM12Q9NTZ6 932 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 CLIC5Q9NZA1 410 aa16.96■□□□□ 0.31
DNMT3A-215ENST00000496570 VPS13AQ96RL7 3174 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 CACNA1IQ9P0X4 2223 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 E2F8A0AVK6 867 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 M0QYV0 167 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 ZBED1O96006 694 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 PNMA6AP0CW24 399 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 GPD2P43304 727 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 PSEN1P49768 467 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 MYL5Q02045 173 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 ADIGQ0VDE8 80 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 CCINQ13939 588 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 STILQ15468 1287 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 ARHGAP44Q17R89 818 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 FSTL4Q6MZW2 842 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 C1orf228Q6PIY5 440 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 APTXQ7Z2E3 356 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 DDX42Q86XP3 938 aaKnown RBP eCLIP16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 C1orf210Q8IVY1 113 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 SCML4Q8N228 414 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 ZNF606Q8WXB4 792 aa16.95■□□□□ 0.3
DNMT3A-215ENST00000496570 EZH1Q92800 747 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms