RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 IL21Q9HBE4 155 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 LUC7LQ9NQ29 371 aaKnown RBP22.84■■□□□ 1.25
C9orf3-222ENST00000496567 GMIPQ9P107 970 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 CHORDC1Q9UHD1 332 aaPredicted RBP22.84■■□□□ 1.25
C9orf3-222ENST00000496567 KCNA5P22460 613 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 SCNN1AP37088 669 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 SLC6A3Q01959 620 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 EFHC1Q5JVL4 640 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 OLFML1Q6UWY5 402 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 CLEC4CQ8WTT0 213 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 TRIM62Q9BVG3 475 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 WDR6Q9NNW5 1121 aaKnown RBP22.84■■□□□ 1.25
C9orf3-222ENST00000496567 ANKRD62A6NC57 917 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 H3BQ06 376 aaPredicted RBP22.83■■□□□ 1.25
C9orf3-222ENST00000496567 GLI1P08151 1106 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 H2AFZP0C0S5 128 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 ZDHHC11BP0C7U3 371 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 NTHL1P78549 312 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 MTF1Q14872 753 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 SNX30Q5VWJ9 437 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 H2AFVQ71UI9 128 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 GAREM2Q75VX8 874 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 FEZF2Q8TBJ5 459 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 MCRS1Q96EZ8 462 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 NECTIN4Q96NY8 510 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 ATXN3LQ9H3M9 355 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 ASNSD1Q9NWL6 643 aa22.83■■□□□ 1.25
C9orf3-222ENST00000496567 MYO16Q9Y6X6 1858 aa22.83■■□□□ 1.24
C9orf3-222ENST00000496567 YJEFN3A6XGL0 299 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 E7ENQ6 273 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 LTFP02788 710 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 YWHAGP61981 247 aaKnown RBP eCLIP22.82■■□□□ 1.24
C9orf3-222ENST00000496567 CCZ1BP86790 482 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 CCZ1P86791 482 aaPredicted RBP22.82■■□□□ 1.24
C9orf3-222ENST00000496567 CLUL1Q15846 466 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 PRSS36Q5K4E3 855 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 FAM102AQ5T9C2 384 aaPredicted RBP22.82■■□□□ 1.24
C9orf3-222ENST00000496567 SLC26A9Q7LBE3 791 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 BHLHA9Q7RTU4 235 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 TMEM150AQ86TG1 271 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 DNAAF5Q86Y56 855 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 C3orf20Q8ND61 904 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 NDRG1Q92597 394 aaKnown RBP22.82■■□□□ 1.24
C9orf3-222ENST00000496567 MRPS31Q92665 395 aaKnown RBP22.82■■□□□ 1.24
C9orf3-222ENST00000496567 FAM149B1Q96BN6 582 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 ZNF653Q96CK0 615 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 CLIC5Q9NZA1 410 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 MRPS23Q9Y3D9 190 aaKnown RBP22.82■■□□□ 1.24
C9orf3-222ENST00000496567 C2orf16Q68DN1 1984 aa22.82■■□□□ 1.24
C9orf3-222ENST00000496567 A0A1W2PQH9 124 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 A0A1W2PRU2 124 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 ZNF840PA6NDX5 716 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 ZNF263O14978 683 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 ABL1P00519 1130 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 ABCB4P21439 1286 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 MAGEA1P43355 309 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 GALCP54803 685 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 YWHAZP63104 245 aaKnown RBP22.81■■□□□ 1.24
C9orf3-222ENST00000496567 GPC5P78333 572 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 KRT83P78385 493 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 ARHGAP15Q53QZ3 475 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 SCD5Q86SK9 330 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 ABCC13Q9NSE7 274 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 CNOT8Q9UFF9 292 aaKnown RBP22.81■■□□□ 1.24
C9orf3-222ENST00000496567 ZMYM5Q9UJ78 669 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 INTUQ9ULD6 942 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 CLUHO75153 1309 aa22.81■■□□□ 1.24
C9orf3-222ENST00000496567 GOLGA8SH3BPF8 625 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 HSF2BPO75031 334 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 TADA3O75528 432 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 RALAP11233 206 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 RRM1P23921 792 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 FSHRP23945 695 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 CCR2P41597 374 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 SMAD4Q13485 552 aaKnown RBP22.8■■□□□ 1.24
C9orf3-222ENST00000496567 SLC5A9Q2M3M2 681 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 BSPRYQ5W0U4 402 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 BTBD8Q5XKL5 378 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 DNAJC24Q6P3W2 148 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 SHKBP1Q8TBC3 707 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 CTNNBL1Q8WYA6 563 aaPredicted RBP22.8■■□□□ 1.24
C9orf3-222ENST00000496567 TCEAL4Q96EI5 215 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 CDK5RAP1Q96SZ6 601 aaKnown RBP22.8■■□□□ 1.24
C9orf3-222ENST00000496567 SELENOOQ9BVL4 669 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 POPDC2Q9HBU9 364 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 PARVAQ9NVD7 372 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 PCDHA13Q9Y5I0 950 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 SCINQ9Y6U3 715 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 SOBPA7XYQ1 873 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 DDX6P26196 483 aaKnown RBP eCLIP22.8■■□□□ 1.24
C9orf3-222ENST00000496567 TUBP50607 506 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 BEND5Q7L4P6 421 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 TADA2BQ86TJ2 420 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 ZNF276Q8N554 614 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 SUSD6Q92537 303 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 PIWIL1Q96J94 861 aaKnown RBP22.8■■□□□ 1.24
C9orf3-222ENST00000496567 THAP2Q9H0W7 228 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 NMUR1Q9HB89 426 aa22.8■■□□□ 1.24
C9orf3-222ENST00000496567 MRPL47Q9HD33 250 aaKnown RBP22.8■■□□□ 1.24
C9orf3-222ENST00000496567 USP15Q9Y4E8 981 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms