RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 MAF1Q9H063 256 aa6.8□□□□□ -1.32
CCDC39-207ENST00000495817 SLC25A32Q9H2D1 315 aa6.8□□□□□ -1.32
CCDC39-207ENST00000495817 LRIT1Q9P2V4 623 aa6.8□□□□□ -1.32
CCDC39-207ENST00000495817 DNAJB11Q9UBS4 358 aa6.8□□□□□ -1.32
CCDC39-207ENST00000495817 HERC5Q9UII4 1024 aaKnown RBP6.8□□□□□ -1.32
CCDC39-207ENST00000495817 ANAPC4Q9UJX5 808 aa6.8□□□□□ -1.32
CCDC39-207ENST00000495817 MRPS17Q9Y2R5 130 aaKnown RBP6.8□□□□□ -1.32
CCDC39-207ENST00000495817 A0A0B4J269 797 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 CCDC151A5D8V7 595 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 IRAK2O43187 625 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 ASNA1O43681 348 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 CCNT2O60583 730 aaKnown RBP6.79□□□□□ -1.32
CCDC39-207ENST00000495817 SRGAP2O75044 1071 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 TNFRSF6BO95407 300 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 NTSR2O95665 410 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 ITGA2BP08514 1039 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 PECAM1P16284 738 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-207ENST00000495817 PRKAR1BP31321 381 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 FOLR3P41439 243 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 TUBB3Q13509 450 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 CCNIQ14094 377 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 CD300EQ496F6 205 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-207ENST00000495817 RBM20Q5T481 1227 aaKnown RBP6.79□□□□□ -1.32
CCDC39-207ENST00000495817 CERCAMQ5T4B2 595 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 ARHGAP40Q5TG30 622 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 KIAA0895LQ68EN5 471 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 JMJD6Q6NYC1 403 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-207ENST00000495817 OLFML1Q6UWY5 402 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 SLC15A3Q8IY34 581 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 OTUD7AQ8TE49 926 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-207ENST00000495817 RSC1A1Q92681 617 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 PGBD1Q96JS3 809 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 SAGE1Q9NXZ1 904 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 C11orf21Q9P2W6 132 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 ZNF69Q9UC07 566 aa6.79□□□□□ -1.32
CCDC39-207ENST00000495817 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.79□□□□□ -1.32
CCDC39-207ENST00000495817 IPO5O00410 1097 aaKnown RBP6.78□□□□□ -1.32
CCDC39-207ENST00000495817 YY2O15391 372 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 MPPED1O15442 326 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 ORC4O43929 436 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 CSF1RP07333 972 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 GATA3P23771 443 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 BCAT1P54687 386 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 NXPH1P58417 271 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 ATP1A4Q13733 1029 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 PTCHD3Q3KNS1 767 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 RGS7BPQ6MZT1 257 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-207ENST00000495817 CCDC70Q6NSX1 233 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 DNAJB14Q8TBM8 379 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 ACTRT2Q8TDY3 377 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 TBATAQ96M53 351 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 TP63Q9H3D4 680 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-207ENST00000495817 GBA2Q9HCG7 927 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-207ENST00000495817 ITM2CQ9NQX7 267 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 VPS51Q9UID3 782 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 SCAF8Q9UPN6 1271 aaKnown RBP6.78□□□□□ -1.32
CCDC39-207ENST00000495817 SSX2IPQ9Y2D8 614 aa6.78□□□□□ -1.32
CCDC39-207ENST00000495817 ZAR1LA6NP61 321 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 VIPP01282 170 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 ARP10275 920 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 CXCR5P32302 372 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 PDE6CP51160 858 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 ZNF169Q14929 603 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-207ENST00000495817 PTPRRQ15256 657 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 VPS53Q5VIR6 699 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 LIN54Q6MZP7 749 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 CYP26C1Q6V0L0 522 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 RASGRP3Q8IV61 690 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 PAF1Q8N7H5 531 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 B3GALNT2Q8NCR0 500 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 GPR150Q8NGU9 434 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 MBD3L2Q8NHZ7 208 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-207ENST00000495817 ABHD5Q8WTS1 349 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 FAM136AQ96C01 138 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 FAM167BQ9BTA0 163 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 AMBRA1Q9C0C7 1298 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 C9orf78Q9NZ63 289 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-207ENST00000495817 INSL6Q9Y581 213 aa6.77□□□□□ -1.33
CCDC39-207ENST00000495817 PCDH17O14917 1159 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 WDHD1O75717 1129 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-207ENST00000495817 EPHA3P29320 983 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 PGDP52209 483 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 ALDH18A1P54886 795 aaKnown RBP6.76□□□□□ -1.33
CCDC39-207ENST00000495817 TIAL1Q01085 375 aaKnown RBP eCLIP6.76□□□□□ -1.33
CCDC39-207ENST00000495817 GPS1Q13098 491 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 ABLIM2Q6H8Q1 611 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 SULT6B1Q6IMI4 303 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 KLHL17Q6TDP4 642 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 MMS22LQ6ZRQ5 1243 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 SLC30A5Q8TAD4 765 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 MYCBPAPQ8TBZ2 947 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 CAGE1Q8TC20 777 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 LPIN2Q92539 896 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 ZG16BQ96DA0 208 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 PDLIM2Q96JY6 352 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 ZSCAN31Q96LW9 406 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-207ENST00000495817 NUDT22Q9BRQ3 303 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 SAYSD1Q9NPB0 183 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 LZTS1Q9Y250 596 aa6.76□□□□□ -1.33
CCDC39-207ENST00000495817 LRRFIP2Q9Y608 721 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms