RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 CHST13Q8NET6 341 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 FBXO27Q8NI29 283 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 COPS5Q92905 334 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 NMUR2Q9GZQ4 415 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 RPF1Q9H9Y2 349 aaKnown RBP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 TTLL3Q9Y4R7 772 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 KRT36O76013 467 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 HMGCRP04035 888 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 IL4RP24394 825 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 PCK1P35558 622 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 ZNF143P52747 638 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 HSF5Q4G112 596 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 SPDYAQ5MJ70 313 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 OR6B2Q6IFH4 312 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 NSL1Q96IY1 281 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 GPR20Q99678 358 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 MAGEB5Q9BZ81 275 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 FZD8Q9H461 694 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 WDR35Q9P2L0 1181 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 MARCOQ9UEW3 520 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 COPEO14579 308 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 ENDOD1O94919 500 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 KITP10721 976 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 EDNRBP24530 442 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 STIP1P31948 543 aaKnown RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 MRPS5P82675 430 aaKnown RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 RCN1Q15293 331 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 CA9Q16790 459 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 CAPRIN2Q6IMN6 1127 aaKnown RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 LBX2Q6XYB7 198 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 FAM183BPQ6ZVS7 135 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 CAND1Q86VP6 1230 aaKnown RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 CHSY1Q86X52 802 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 ARMC2Q8NEN0 867 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 CCDC110Q8TBZ0 833 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 TRPM4Q8TD43 1214 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-217ENST00000495688 OSBPL1AQ9BXW6 950 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 ASNSD1Q9NWL6 643 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 TRIP11Q15643 1979 aa13.55□□□□□ -0.24
PTPN7-217ENST00000495688 CEP350Q5VT06 3117 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 IGKV6-21A0A0C4DH24 114 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 C2CD4BA6NLJ0 364 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 NOP56O00567 594 aaKnown RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 FCHO1O14526 889 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 GPD1P21695 349 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 GABRB2P47870 512 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 IGBP1P78318 339 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 MBTD1Q05BQ5 628 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 EFCAB12Q6NXP0 572 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 TRMT10BQ6PF06 316 aaKnown RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 NRG4Q8WWG1 115 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 OXNAD1Q96HP4 312 aaPredicted RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 RNF157Q96PX1 679 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 DCLRE1BQ9H816 532 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 NGRNQ9NPE2 291 aaKnown RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 ZC3H7BQ9UGR2 993 aaKnown RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 PRPSAP2O60256 369 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 STAG3L1P0CL83 205 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 TUBP50607 506 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 PQLC3Q8N755 202 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 CPB2Q96IY4 423 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 CNPY3Q9BT09 278 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 POPDC2Q9HBU9 364 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 ARHGEF4Q9NR80 690 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 NMRK1Q9NWW6 199 aa13.54□□□□□ -0.24
PTPN7-217ENST00000495688 MTO1Q9Y2Z2 717 aaKnown RBP13.54□□□□□ -0.24
PTPN7-217ENST00000495688 MYO18AQ92614 2054 aaKnown RBP13.53□□□□□ -0.24
PTPN7-217ENST00000495688 MCM3APO60318 1980 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 BPTFQ12830 3046 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 F5H423 210 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-217ENST00000495688 ESRRAP11474 423 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-217ENST00000495688 PEX19P40855 299 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 GRIA1P42261 906 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 NDST1P52848 882 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 BST1Q10588 318 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 KRT81Q14533 505 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
PTPN7-217ENST00000495688 TREML1Q86YW5 311 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 MPP5Q8N3R9 675 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 PCDH19Q8TAB3 1148 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 MCUR1Q96AQ8 359 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 ACAP3Q96P50 834 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 GGA3Q9NZ52 723 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 TSPAN16Q9UKR8 245 aa13.53□□□□□ -0.24
PTPN7-217ENST00000495688 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms