RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 BBS7Q8IWZ6 715 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 FAM186BQ8IYM0 893 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 ADGRG2Q8IZP9 1017 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 CRYBG2Q8N1P7 616 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 PHTF2Q8N3S3 785 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 GPR161Q8N6U8 529 aaKnown RBP12.33□□□□□ -0.44
VTI1A-208ENST00000494728 OVCA2Q8WZ82 227 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 ARID3AQ99856 593 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-208ENST00000494728 ARRDC1-AS1Q9H2J1 176 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 NMUR1Q9HB89 426 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 EHD2Q9NZN4 543 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 CDV3Q9UKY7 258 aaKnown RBP12.33□□□□□ -0.44
VTI1A-208ENST00000494728 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 ADAMTS9Q9P2N4 1935 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 ASCC3Q8N3C0 2202 aaKnown RBP12.32□□□□□ -0.44
VTI1A-208ENST00000494728 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-208ENST00000494728 MDM4O15151 490 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 TRIM24O15164 1050 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 AXIN1O15169 862 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 LRP3O75074 770 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 ATG13O75143 517 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 CILPO75339 1184 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 EPN2O95208 641 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 TBX18O95935 607 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
VTI1A-208ENST00000494728 AMPD2Q01433 879 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 CSRP2Q16527 193 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 LY6G5CQ5SRR4 150 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 HECTD3Q5T447 861 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 EMC10Q5UCC4 262 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 TCEAL6Q6IPX3 200 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 INTS8Q75QN2 995 aaKnown RBP12.32□□□□□ -0.44
VTI1A-208ENST00000494728 UNC93AQ86WB7 457 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 FMR1NBQ8N0W7 255 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-208ENST00000494728 CCDC33Q8N5R6 958 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 ALLCQ8N6M5 410 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 PDZD8Q8NEN9 1154 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 TAF4BQ92750 862 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 TCEAL3Q969E4 200 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 TPSD1Q9BZJ3 242 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 NIF3L1Q9GZT8 377 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 HCN2Q9UL51 889 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 INVSQ9Y283 1065 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 CHD6Q8TD26 2715 aa12.32□□□□□ -0.44
VTI1A-208ENST00000494728 PRR5-ARHGAP8B1AHC4 643 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 TLR5O60602 858 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 APBB3O95704 486 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 ADH5P11766 374 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 P4HA1P13674 534 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 BCKDHBP21953 392 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 TUBP50607 506 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 MCCD1P59942 119 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-208ENST00000494728 ARHGAP8P85298 464 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 NR1H3Q13133 447 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 ADAM9Q13443 819 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 PLK5Q496M5 336 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 ANO7Q6IWH7 933 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 TMEM92Q6UXU6 159 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 ETFBKMTQ8IXQ9 262 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 CAMKK1Q8N5S9 505 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 MDGA1Q8NFP4 955 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 ACDQ96AP0 544 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 HNRNPABQ99729 332 aaKnown RBP12.31□□□□□ -0.44
VTI1A-208ENST00000494728 DUSP15Q9H1R2 295 aaPredicted RBP12.31□□□□□ -0.44
VTI1A-208ENST00000494728 NUDT5Q9UKK9 219 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 MMP17Q9ULZ9 603 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 CACNA1EQ15878 2313 aa12.31□□□□□ -0.44
VTI1A-208ENST00000494728 MUC22E2RYF6 1773 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-208ENST00000494728 A0A1W2PQH9 124 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 E2F8A0AVK6 867 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 TRIM49BA6NDI0 452 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 SGK1O00141 431 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 ADAM23O75077 832 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 KAT7O95251 611 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 FAM200BP0CF97 657 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 PSMC2P35998 433 aaKnown RBP12.3□□□□□ -0.44
VTI1A-208ENST00000494728 PRCPP42785 496 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 KIR2DL1P43626 348 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-208ENST00000494728 CBWD6Q4V339 395 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 CBWD3Q5JTY5 395 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 PLA2G2CQ5R387 149 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 CBWD5Q5RIA9 395 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 PPP1R26Q5T8A7 1209 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-208ENST00000494728 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 SCD5Q86SK9 330 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 RASSF3Q86WH2 238 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 DDX42Q86XP3 938 aaKnown RBP eCLIP12.3□□□□□ -0.44
VTI1A-208ENST00000494728 TMEM25Q86YD3 366 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 MIB1Q86YT6 1006 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 KIAA1958Q8N8K9 716 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 NAT16Q8N8M0 369 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 IL17RCQ8NAC3 791 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 ENGASEQ8NFI3 743 aa12.3□□□□□ -0.44
VTI1A-208ENST00000494728 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms