RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 APOL1O14791 398 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 ATP6V1G2O95670 118 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 STAU1O95793 577 aaKnown RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 TFE3P19532 575 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 ADRA1DP25100 572 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 HOXA11P31270 313 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 SWT1Q5T5J6 900 aaKnown RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 NT5DC4Q86YG4 428 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 PQLC3Q8N755 202 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 OR6J1Q8NGC5 347 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 PCDH19Q8TAB3 1148 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 CYTH2Q99418 400 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 MAGEB5Q9BZ81 275 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 KATNBL1Q9H079 304 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 DPEP3Q9H4B8 488 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 PCDH18Q9HCL0 1135 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 IKBKGQ9Y6K9 419 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 A8MXQ7 604 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 SMAPO00193 183 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 EDF1O60869 148 aaKnown RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 GABBR2O75899 941 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 MT-ND3P03897 115 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 FGFR1P11362 822 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 AKAP5P24588 427 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 ATXN1P54253 815 aaKnown RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 ACVR2BQ13705 512 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 PDK2Q15119 407 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 E2F5Q15329 346 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 KBTBD12Q3ZCT8 623 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 LDLRAD1Q5T700 205 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 CLEC4CQ8WTT0 213 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 SLC35F5Q8WV83 523 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 EMID1Q96A84 441 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 TBC1D31Q96DN5 1066 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 CFAP36Q96G28 342 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 DHRS4Q9BTZ2 278 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 SNRNP25Q9BV90 132 aaKnown RBP11.67□□□□□ -0.54
CHMP3-209ENST00000494623 PHACTR1Q9C0D0 580 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 NOD2Q9HC29 1040 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 SLC17A7Q9P2U7 560 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 FETUBQ9UGM5 382 aa11.67□□□□□ -0.54
CHMP3-209ENST00000494623 TCRBV9S1A1TA0A576 114 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ZWINTO95229 277 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ZBED1O96006 694 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 MMP3P08254 477 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ADORA2BP29275 332 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 KCNJ11Q14654 390 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 SETDB1Q15047 1291 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 STILQ15468 1287 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 DCAF4L1Q3SXM0 396 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 PKDCCQ504Y2 493 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 TMEM110Q86TL2 294 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 VSIG1Q86XK7 387 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ANKLE1Q8NAG6 615 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 MZB1Q8WU39 189 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 OSMRQ99650 979 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 SLC4A5Q9BY07 1137 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 GCOM2Q9BZD3 368 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 MYLK2Q9H1R3 596 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 PAK5Q9P286 719 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 SBF1O95248 1867 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 BTBD19C9JJ37 291 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 KRT16P08779 473 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 LCP1P13796 627 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 FAAP100Q0VG06 881 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 PTK7Q13308 1070 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 DGKDQ16760 1214 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 RGS9BPQ6ZS82 235 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 OTOAQ7RTW8 1153 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 SESTD1Q86VW0 696 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 AGGF1Q8N302 714 aaeCLIP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 BEST2Q8NFU1 509 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 CCDC110Q8TBZ0 833 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 TRIM6Q9C030 488 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ADAMTS10Q9H324 1103 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 PLEKHA5Q9HAU0 1116 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 KLK14Q9P0G3 267 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 TEX264Q9Y6I9 313 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 USH1CQ9Y6N9 552 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 DYNC1LI2O43237 492 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 STRNO43815 780 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 FAM155BO75949 473 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 APRTP07741 180 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 INHBAP08476 426 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 CCDC130P13994 396 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 HDAC4P56524 1084 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 SOWAHAQ2M3V2 549 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 DUSP28Q4G0W2 176 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 SLC27A1Q6PCB7 646 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 PRPF39Q86UA1 669 aaKnown RBP11.66□□□□□ -0.54
CHMP3-209ENST00000494623 CTAGE3PQ8IX95 158 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 BANPQ8N9N5 519 aa11.66□□□□□ -0.54
CHMP3-209ENST00000494623 ERP27Q96DN0 273 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms