RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 DHX8Q14562 1220 aaKnown RBP5.24□□□□□ -1.57
SMC4-224ENST00000494612 CCDC38Q502W7 563 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 PGBD2Q6P3X8 592 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 SMC5Q8IY18 1101 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 MYCT1Q8N699 235 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 C11orf44Q8N8P7 122 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 ATRIPQ8WXE1 791 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 ATG4AQ8WYN0 398 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 SNX27Q96L92 541 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 SELENOOQ9BVL4 669 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 C1QTNF7Q9BXJ2 289 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 IL17RBQ9NRM6 502 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 ASB6Q9NWX5 421 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 RGL1Q9NZL6 768 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 LRFN1Q9P244 771 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 IGSF9Q9P2J2 1179 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 DKK3Q9UBP4 350 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 SNX14Q9Y5W7 946 aa5.24□□□□□ -1.57
SMC4-224ENST00000494612 CLCA1A8K7I4 914 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 AGPSO00116 658 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 INMTO95050 263 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 PECAM1P16284 738 aaPredicted RBP5.23□□□□□ -1.57
SMC4-224ENST00000494612 HOXB6P17509 224 aaKnown RBP5.23□□□□□ -1.57
SMC4-224ENST00000494612 PRKAR1BP31321 381 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 FOLR3P41439 243 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 HALP42357 657 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 COPAP53621 1224 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 ICA1Q05084 483 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 RAB30Q15771 203 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 TBCCQ15814 346 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 PFKFB4Q16877 469 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 MANEALQ5VSG8 457 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 SLC9A4Q6AI14 798 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 SFRP4Q6FHJ7 346 aaPredicted RBP5.23□□□□□ -1.57
SMC4-224ENST00000494612 ZNF788Q6ZQV5 615 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 KRT28Q7Z3Y7 464 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 CCDC28AQ8IWP9 274 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 STYXQ8WUJ0 223 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 OSCP1Q8WVF1 389 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 TFAP2BQ92481 460 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 GLG1Q92896 1179 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 FBXL20Q96IG2 436 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 ZC3H10Q96K80 434 aaKnown RBP5.23□□□□□ -1.57
SMC4-224ENST00000494612 UROC1Q96N76 676 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 OSBPL9Q96SU4 736 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 NELL2Q99435 816 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 GDF15Q99988 308 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 C17orf80Q9BSJ5 609 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 STK33Q9BYT3 514 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 DHX36Q9H2U1 1008 aaKnown RBP5.23□□□□□ -1.57
SMC4-224ENST00000494612 EPS8L2Q9H6S3 715 aa5.23□□□□□ -1.57
SMC4-224ENST00000494612 MORC2Q9Y6X9 1032 aaPredicted RBP5.23□□□□□ -1.57
SMC4-224ENST00000494612 AQP7P3A6NL99 342 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 LGALS16A8MUM7 142 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 VWC2LB2RUY7 222 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 YY2O15391 372 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 CD3EAPO15446 510 aaKnown RBP5.22□□□□□ -1.57
SMC4-224ENST00000494612 PIP5K1CO60331 668 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 COQ9O75208 318 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 USP1O94782 785 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 TNFRSF6BO95407 300 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 PDIA3P30101 505 aaKnown RBP5.22□□□□□ -1.57
SMC4-224ENST00000494612 PPIFP30405 207 aaKnown RBP5.22□□□□□ -1.57
SMC4-224ENST00000494612 UQCRC1P31930 480 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 PDE6CP51160 858 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 SRSF4Q08170 494 aaKnown RBP5.22□□□□□ -1.57
SMC4-224ENST00000494612 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 FAXCQ5TGI0 409 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 CLEC9AQ6UXN8 241 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 KIAA0408Q6ZU52 694 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 MAVSQ7Z434 540 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 ABRAQ8N0Z2 381 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 FAM109AQ8N4B1 249 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 ANKRD42Q8N9B4 389 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 XAGE5Q8WWM1 108 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 CCT6BQ92526 530 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 R3HDM4Q96D70 268 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 HIST1H2AAQ96QV6 131 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 SLC25A32Q9H2D1 315 aa5.22□□□□□ -1.57
SMC4-224ENST00000494612 CCNL1Q9UK58 526 aaPredicted RBP5.22□□□□□ -1.57
SMC4-224ENST00000494612 SCAF8Q9UPN6 1271 aaKnown RBP5.22□□□□□ -1.57
SMC4-224ENST00000494612 ADM5C9JUS6 153 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 TRIM38O00635 465 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 HNRNPDLO14979 420 aaKnown RBP5.21□□□□□ -1.58
SMC4-224ENST00000494612 PEX1O43933 1283 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 EIF3JO75822 258 aaKnown RBP5.21□□□□□ -1.58
SMC4-224ENST00000494612 FESP07332 822 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 SRGAP2BP0DMP2 458 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 IDEP14735 1019 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 WT1P19544 449 aaPredicted RBP5.21□□□□□ -1.58
SMC4-224ENST00000494612 LIPAP38571 399 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 GATMP50440 423 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 ZNF81P51508 661 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 PGDP52209 483 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 PDE1AP54750 535 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 GALNT1Q10472 559 aaPredicted RBP5.21□□□□□ -1.58
SMC4-224ENST00000494612 CCNIQ14094 377 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.21□□□□□ -1.58
SMC4-224ENST00000494612 TREML2Q5T2D2 321 aa5.21□□□□□ -1.58
SMC4-224ENST00000494612 VWA1Q6PCB0 445 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms