RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MBD1Q9UIS9 605 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 KLK13Q9UKR3 277 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 FRMD4BQ9Y2L6 1034 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 C2CD2Q9Y426 696 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 HELZP42694 1942 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 SETXQ7Z333 2677 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 TRAV19A0A0A6YYK7 116 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 SGK1O00141 431 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 SERPINC1P01008 464 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 NR3C1P04150 777 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 USP17L7P0C7H9 530 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 CHRM1P11229 460 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 ZNF18P17022 549 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 GARTP22102 1010 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 LMO2P25791 158 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 FAM193AP78312 1265 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 TSPY1Q01534 308 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 SV2CQ496J9 727 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 CCDC40Q4G0X9 1142 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 FBXO43Q4G163 708 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 USP39Q53GS9 565 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 FILIP1Q7Z7B0 1213 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 GLIS3Q8NEA6 775 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 POMGNT1Q8WZA1 660 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 ATP2A3Q93084 1043 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 TSPAN18Q96SJ8 248 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 SRRTQ9BXP5 876 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 RNF38Q9H0F5 515 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 KIAA1586Q9HCI6 787 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 AGPAT3Q9NRZ7 376 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 FANCLQ9NW38 375 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 SMPD4Q9NXE4 827 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 STYXL1Q9Y6J8 313 aa12.5□□□□□ -0.41
CSNK1E-212ENST00000494610 MYO18AQ92614 2054 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 PTPRJQ12913 1337 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 KCNJ18B7U540 433 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 MAPK13O15264 365 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 LDHAP00338 332 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 CYP17A1P05093 508 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 HDCP19113 662 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 TIE1P35590 1138 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 AMPD2Q01433 879 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 RING1Q06587 406 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 ADAM9Q13443 819 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 KCNJ12Q14500 433 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 CRY1Q16526 586 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 TRIM61Q5EBN2 209 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 TXNDC5Q8NBS9 432 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 ACDQ96AP0 544 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 TRMT2BQ96GJ1 504 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 CNOT6LQ96LI5 555 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 MYRFLQ96LU7 910 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 DUSP9Q99956 384 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 ACBD6Q9BR61 282 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 NME7Q9Y5B8 376 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 SNX9Q9Y5X1 595 aa12.49□□□□□ -0.41
CSNK1E-212ENST00000494610 TAF4O00268 1085 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 LEFTY2O00292 366 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 TGFB1I1O43294 461 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 EXOC3O60645 756 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 KLF8O95600 359 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 KRT19P08727 400 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 PDGFRBP09619 1106 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 CEACAM1P13688 526 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 BDNFP23560 247 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 ITPKAP23677 461 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 PSMC2P35998 433 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 MTIF2P46199 727 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 PMS1P54277 932 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 CACNA2D1P54289 1103 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 MARSP56192 900 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 RPL10AP62906 217 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 KDSRQ06136 332 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 ENPEPQ07075 957 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 SMARCB1Q12824 385 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 NFE2Q16621 373 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 SOWAHAQ2M3V2 549 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 TCP11X2Q5H9J9 407 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 SPATA2LQ8IUW3 424 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 IL17RCQ8NAC3 791 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 XXYLT1Q8NBI6 393 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 ZCCHC14Q8WYQ9 949 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 PDE11AQ9HCR9 933 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 CRTAC1Q9NQ79 661 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 TMEM30AQ9NV96 361 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 LIMA1Q9UHB6 759 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-212ENST00000494610 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
CSNK1E-212ENST00000494610 TRIM24O15164 1050 aa12.47□□□□□ -0.41
CSNK1E-212ENST00000494610 STX10O60499 249 aa12.47□□□□□ -0.41
CSNK1E-212ENST00000494610 HUS1O60921 280 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms