RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PKN3Q6P5Z2 889 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 TRIM59Q8IWR1 403 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 NMUR1Q9HB89 426 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 TBC1D14Q9P2M4 693 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 LILRB5O75023 590 aa35■■■■□ 3.19
CBX4-203ENST00000494546 RNF40O75150 1001 aa35■■■■□ 3.19
CBX4-203ENST00000494546 FGFR1OPO95684 399 aaKnown RBP35■■■■□ 3.19
CBX4-203ENST00000494546 TBX18O95935 607 aa35■■■■□ 3.19
CBX4-203ENST00000494546 CD19P15391 556 aa35■■■■□ 3.19
CBX4-203ENST00000494546 DHCR24Q15392 516 aa35■■■■□ 3.19
CBX4-203ENST00000494546 GOLGA7BQ2TAP0 167 aa35■■■■□ 3.19
CBX4-203ENST00000494546 CYLDQ9NQC7 956 aa35■■■■□ 3.19
CBX4-203ENST00000494546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP35■■■■□ 3.19
CBX4-203ENST00000494546 MYO16Q9Y6X6 1858 aa35■■■■□ 3.19
CBX4-203ENST00000494546 P4HA2O15460 535 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 SLC8A3P57103 927 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 KCNH2Q12809 1159 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 SGO2Q562F6 1265 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 PPM1KQ8N3J5 372 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 UBR7Q8N806 425 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 ANKRD52Q8NB46 1076 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 RWDD2AQ9UIY3 292 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 NAGPAQ9UK23 515 aa34.99■■■■□ 3.19
CBX4-203ENST00000494546 DMDP11532 3685 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 K7ESF4 209 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 PAPSS2O95340 614 aaPredicted RBP34.98■■■■□ 3.19
CBX4-203ENST00000494546 CCDC192P0DO97 292 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 ATP5C1P36542 298 aaKnown RBP34.98■■■■□ 3.19
CBX4-203ENST00000494546 MARSP56192 900 aaKnown RBP34.98■■■■□ 3.19
CBX4-203ENST00000494546 FBXO43Q4G163 708 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 CCDC186Q7Z3E2 898 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 PIGZQ86VD9 579 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 TTC30AQ86WT1 665 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 SUMF1Q8NBK3 374 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 WBP2Q969T9 261 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 HINFPQ9BQA5 517 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 CLSTN2Q9H4D0 955 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 NUDT5Q9UKK9 219 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 TSPAN16Q9UKR8 245 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 USP3Q9Y6I4 520 aa34.98■■■■□ 3.19
CBX4-203ENST00000494546 CHURC1-FNTBB4DL54 471 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 ATG13O75143 517 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 AFPP02771 609 aaKnown RBP34.97■■■■□ 3.19
CBX4-203ENST00000494546 RARGP13631 454 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 OPRD1P41143 372 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 FNTBP49356 437 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 DMWDQ09019 674 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 GAB4Q2WGN9 574 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 HEATR6Q6AI08 1181 aaKnown RBP34.97■■■■□ 3.19
CBX4-203ENST00000494546 RHBDF2Q6PJF5 856 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 TMEM270Q6UE05 265 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 CREBRFQ8IUR6 639 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 LMO3Q8TAP4 145 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP34.97■■■■□ 3.19
CBX4-203ENST00000494546 HESX1Q9UBX0 185 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 PCDHB4Q9Y5E5 795 aa34.97■■■■□ 3.19
CBX4-203ENST00000494546 ADH1CP00326 375 aa34.96■■■■□ 3.19
CBX4-203ENST00000494546 SCD5Q86SK9 330 aa34.96■■■■□ 3.19
CBX4-203ENST00000494546 BBS7Q8IWZ6 715 aa34.96■■■■□ 3.19
CBX4-203ENST00000494546 EZH1Q92800 747 aaPredicted RBP34.96■■■■□ 3.19
CBX4-203ENST00000494546 KAT5Q92993 513 aa34.96■■■■□ 3.19
CBX4-203ENST00000494546 KLF16Q9BXK1 252 aaPredicted RBP34.96■■■■□ 3.19
CBX4-203ENST00000494546 UBXN6Q9BZV1 441 aa34.96■■■■□ 3.19
CBX4-203ENST00000494546 MDM4O15151 490 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 VDRP11473 427 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 HOXC13P31276 330 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 PSEN1P49768 467 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 C10orf120Q5SQS8 335 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 RRAGAQ7L523 313 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 EHBP1Q8NDI1 1231 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 OTUB2Q96DC9 234 aa34.95■■■■□ 3.19
CBX4-203ENST00000494546 RALAP11233 206 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 ADH5P11766 374 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 BCAT1P54687 386 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 PDE4CQ08493 712 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 GOLGA8FQ08AF8 430 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 GOLGA8DPQ0D2H9 430 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 LY6G5CQ5SRR4 150 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 RPLP0P6Q8NHW5 317 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 EPC1Q9H2F5 836 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 DNMT3LQ9UJW3 386 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 SLC8A2Q9UPR5 921 aa34.94■■■■□ 3.18
CBX4-203ENST00000494546 TULP2O00295 520 aa34.93■■■■□ 3.18
CBX4-203ENST00000494546 TADA2BQ86TJ2 420 aa34.93■■■■□ 3.18
CBX4-203ENST00000494546 ARHGEF19Q8IW93 802 aa34.93■■■■□ 3.18
CBX4-203ENST00000494546 MLKLQ8NB16 471 aa34.93■■■■□ 3.18
CBX4-203ENST00000494546 UBA3Q8TBC4 463 aa34.93■■■■□ 3.18
CBX4-203ENST00000494546 KIAA1257Q9ULG3 409 aa34.93■■■■□ 3.18
CBX4-203ENST00000494546 SMG5Q9UPR3 1016 aaKnown RBP34.93■■■■□ 3.18
CBX4-203ENST00000494546 SLC6A11P48066 632 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 TKTL1P51854 596 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 BST2Q10589 180 aaKnown RBP34.92■■■■□ 3.18
CBX4-203ENST00000494546 RAB41Q5JT25 222 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 KLHDC10Q6PID8 442 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 LONP2Q86WA8 852 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 RUBCNQ92622 972 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 CNOT6LQ96LI5 555 aaKnown RBP34.92■■■■□ 3.18
CBX4-203ENST00000494546 MED15Q96RN5 788 aa34.92■■■■□ 3.18
CBX4-203ENST00000494546 INTS2Q9H0H0 1204 aaKnown RBP34.92■■■■□ 3.18
CBX4-203ENST00000494546 POLR3BQ9NW08 1133 aaPredicted RBP34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms