RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TNRC6BQ9UPQ9 1833 aaKnown RBP10.21□□□□□ -0.77
UBR4-216ENST00000494503 E2F8A0AVK6 867 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 NEDD8-MDP1E9PL57 170 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 AP5Z1O43299 807 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 HSP90AA1P07900 732 aaKnown RBP10.21□□□□□ -0.77
UBR4-216ENST00000494503 CEACAM1P13688 526 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 CCDC130P13994 396 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 ENGP17813 658 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 TRIM21P19474 475 aaKnown RBP10.21□□□□□ -0.77
UBR4-216ENST00000494503 ITPKAP23677 461 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 HOXD13P35453 343 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 EIF2DP41214 584 aaKnown RBP10.21□□□□□ -0.77
UBR4-216ENST00000494503 P2RY2P41231 377 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 AFMP43652 599 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 GOLGA8FQ08AF8 430 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 GOLGA8DPQ0D2H9 430 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 TPGS1Q6ZTW0 290 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 ACOT1Q86TX2 421 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 SYT12Q8IV01 421 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 BBS7Q8IWZ6 715 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 CHPFQ8IZ52 775 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 SMARCD1Q96GM5 515 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 TNIP3Q96KP6 325 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 SCNM1Q9BWG6 230 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 CUEDC2Q9H467 287 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 FAM49BQ9NUQ9 324 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 TMEM30AQ9NV96 361 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 DNAJC17Q9NVM6 304 aaKnown RBP10.21□□□□□ -0.77
UBR4-216ENST00000494503 MTMR6Q9Y217 621 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 NME7Q9Y5B8 376 aa10.21□□□□□ -0.77
UBR4-216ENST00000494503 UBE4BO95155 1302 aa10.21□□□□□ -0.78
UBR4-216ENST00000494503 ZFHX4Q86UP3 3567 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 SPAARA0A1B0GVQ0 90 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 PCNX2A6NKB5 2137 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 CDX4O14627 284 aaPredicted RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 TNFRSF10BO14763 440 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 POLR2DO15514 142 aaKnown RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 TGFB1I1O43294 461 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 ADAM23O75077 832 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 NDUFS2O75306 463 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 TULP3O75386 442 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 KIF20AO95235 890 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 OLFM2O95897 454 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 P4HA1P13674 534 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 ADORA2BP29275 332 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 ATICP31939 592 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 TNFRSF4P43489 277 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 KIR2DL1P43626 348 aaPredicted RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 ME1P48163 572 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 NASPP49321 788 aaPredicted RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 MAP3K7CLP57077 242 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 SIM1P81133 766 aaPredicted RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 GFPT1Q06210 699 aaPredicted RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 NCOA4Q13772 614 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 HSF5Q4G112 596 aaPredicted RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 GRAMD4Q6IC98 578 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 KIAA1324Q6UXG2 1013 aaKnown RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 LIMS2Q7Z4I7 341 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 TMEM25Q86YD3 366 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 RGL4Q8IZJ4 473 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 LINC00301Q8NCQ3 95 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 ZNF507Q8TCN5 953 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 SCFD1Q8WVM8 642 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 XPO6Q96QU8 1125 aaKnown RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 BBS2Q9BXC9 721 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 SPHK2Q9NRA0 654 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 TMEM74BQ9NUR3 256 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 KBTBD4Q9NVX7 518 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 FAM13BQ9NYF5 915 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 CALCOCO1Q9P1Z2 691 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 MBD1Q9UIS9 605 aaPredicted RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 LSM7Q9UK45 103 aaKnown RBP10.2□□□□□ -0.78
UBR4-216ENST00000494503 CYP8B1Q9UNU6 501 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 PLXND1Q9Y4D7 1925 aa10.2□□□□□ -0.78
UBR4-216ENST00000494503 TRIM24O15164 1050 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 HYAL3O43820 417 aaPredicted RBP10.19□□□□□ -0.78
UBR4-216ENST00000494503 TLR5O60602 858 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 CUTAO60888 179 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 CSRP1P21291 193 aaKnown RBP10.19□□□□□ -0.78
UBR4-216ENST00000494503 RDXP35241 583 aaKnown RBP10.19□□□□□ -0.78
UBR4-216ENST00000494503 PIK3CAP42336 1068 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 DPP6P42658 865 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 E2F4Q16254 413 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 KNOP1Q1ED39 458 aaKnown RBP10.19□□□□□ -0.78
UBR4-216ENST00000494503 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 EGFLAMQ63HQ2 1017 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 CEP135Q66GS9 1140 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 SLC36A4Q6YBV0 504 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 EPM2AIP1Q7L775 607 aaPredicted RBP10.19□□□□□ -0.78
UBR4-216ENST00000494503 GRAMD1CQ8IYS0 662 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 CEP57L1Q8IYX8 460 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 TERB1Q8NA31 727 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 OLIG1Q8TAK6 271 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 SLC2A14Q8TDB8 520 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 ZCCHC14Q8WYQ9 949 aaKnown RBP10.19□□□□□ -0.78
UBR4-216ENST00000494503 OVCA2Q8WZ82 227 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 ZNF516Q92618 1163 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 OTUB2Q96DC9 234 aa10.19□□□□□ -0.78
UBR4-216ENST00000494503 HSPA12BQ96MM6 686 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms