RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ARTNQ5T4W7 220 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SH3PXD2AQ5TCZ1 1133 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 DAB2IPQ5VWQ8 1189 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 TMCO3Q6UWJ1 677 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 VSTM1Q6UX27 236 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 BBS12Q6ZW61 710 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 JAMLQ86YT9 394 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 THEM5Q8N1Q8 247 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 ATL2Q8NHH9 583 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SLC35B2Q8TB61 432 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CLEC4CQ8WTT0 213 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CASKIN2Q8WXE0 1202 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 MYLPFQ96A32 169 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 MAGOHBQ96A72 148 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 TRIM43Q96BQ3 446 aaPredicted RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 SCLYQ96I15 445 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 C8orf48Q96LL4 319 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 KCNK16Q96T55 309 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 COLEC11Q9BWP8 271 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 GPR62Q9BZJ7 368 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 C11orf49Q9H6J7 331 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CWH43Q9H720 699 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SYNCQ9H7C4 482 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 ST7Q9NRC1 585 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CHST7Q9NS84 486 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 ZDHHC18Q9NUE0 388 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 MTMR10Q9NXD2 777 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 RRN3Q9NYV6 651 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.11□□□□□ -1.27
MSH5-217ENST00000494458 CALCOCO1Q9P1Z2 691 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 AMACRQ9UHK6 382 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 FEZ2Q9UHY8 353 aaPredicted RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 ADAM28Q9UKQ2 775 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 MTUS1Q9ULD2 1270 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 INPP5FQ9Y2H2 1132 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 TDRD15B5MCY1 1934 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 LTBP2Q14767 1821 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 ZSCAN5CA6NGD5 496 aaPredicted RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 OR6C75A6NL08 312 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 I3L4J1 428 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 TTI1O43156 1089 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 AP1G2O75843 785 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 TJP3O95049 919 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 VNN2O95498 520 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 RALAP11233 206 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 TFE3P19532 575 aaPredicted RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 KLRC2P26717 231 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 SDC4P31431 198 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 GBP1P32455 592 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 PBX2P40425 430 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 CETN2P41208 172 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 CARSP49589 748 aaKnown RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 CTCFP49711 727 aaPredicted RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 NDUFV1P49821 464 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 TKTL1P51854 596 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 EPHB4P54760 987 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 AIF1P55008 147 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 CCL23P55773 120 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 SLC7A5Q01650 507 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 DR1Q01658 176 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 SCAPQ12770 1279 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 SEMA3BQ13214 749 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 GPR17Q13304 367 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 IKBKEQ14164 716 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 NFE2Q16621 373 aaPredicted RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 C15orf59Q2T9L4 293 aaPredicted RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 MAP9Q49MG5 647 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 RAB6CQ53S08 254 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 ERMARDQ5T6L9 678 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 SLC9A4Q6AI14 798 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 MFSD5Q6N075 450 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 RHBDF2Q6PJF5 856 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 CCDC137Q6PK04 289 aaKnown RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.1□□□□□ -1.27
MSH5-217ENST00000494458 GPRIN1Q7Z2K8 1008 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 KLHL7Q8IXQ5 586 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 DCP1BQ8IZD4 617 aaKnown RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 IQCKQ8N0W5 287 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 ZNF276Q8N554 614 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 RNF169Q8NCN4 708 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 NTAN1Q96AB6 310 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 PAWRQ96IZ0 340 aaKnown RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 CFAP57Q96MR6 1250 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 TMEM209Q96SK2 561 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 RAB6CQ9H0N0 254 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 POPDC2Q9HBU9 364 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 EPB41L5Q9HCM4 733 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 WDR6Q9NNW5 1121 aaKnown RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 FAM114A2Q9NRY5 505 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 KRT82Q9NSB4 513 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 TMEM39AQ9NV64 488 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 COMMD8Q9NX08 183 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 GRHL1Q9NZI5 618 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 RCOR3Q9P2K3 495 aaPredicted RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 HSFX1Q9UBD0 423 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 R3HDM2Q9Y2K5 976 aaKnown RBP7.1□□□□□ -1.27
MSH5-217ENST00000494458 FAN1Q9Y2M0 1017 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 BACE2Q9Y5Z0 518 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 NLRC5Q86WI3 1866 aa7.1□□□□□ -1.27
MSH5-217ENST00000494458 PTPRDP23468 1912 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms