RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 VCPIP1Q96JH7 1222 aa12.09□□□□□ -0.47
COL25A1-204ENST00000494183 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
COL25A1-204ENST00000494183 NT5MQ9NPB1 228 aa12.09□□□□□ -0.47
COL25A1-204ENST00000494183 KCNK1O00180 336 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 MICAL2O94851 1124 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 RHOCP08134 193 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 PYGMP11217 842 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 SCNN1GP51170 649 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TREML2Q5T2D2 321 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 C11orf63Q6NUN7 778 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 EPS8L3Q8TE67 593 aaKnown RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 ANKRD7Q92527 254 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 SERPINB12Q96P63 405 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 FRMD8P1Q9BZ68 369 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 SENP6Q9GZR1 1112 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 NDE1Q9NXR1 346 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 MRPL42Q9Y6G3 142 aaKnown RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 RICTORQ6R327 1708 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 ADGRA2Q96PE1 1338 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 SLC15A5A6NIM6 579 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 MEFVO15553 781 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 GJB1P08034 283 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 GLI1P08151 1106 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 BDNFP23560 247 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 MAP2K5Q13163 448 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 ERMARDQ5T6L9 678 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TIGD7Q6NT04 549 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 WDR93Q6P2C0 686 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 MFSD7Q6UXD7 560 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 NT5DC4Q86YG4 428 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TMA16Q96EY4 203 aaKnown RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TLR10Q9BXR5 811 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 SLC7A5P2Q9GIP4 190 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 FBXO44Q9H4M3 255 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 LRRC40Q9H9A6 602 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 MYPNQ86TC9 1320 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 E5RJQ4 531 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 CHUKO15111 745 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 FGRP09769 529 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 SPATA31C1P0DKV0 1188 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 HIC1Q14526 733 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 CHI3L2Q15782 390 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 DENND1BQ6P3S1 775 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 USP13Q92995 863 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 CDC42EP4Q9H3Q1 356 aaKnown RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 DMAP1Q9NPF5 467 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-204ENST00000494183 THEGQ9P2T0 379 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 RIPK3Q9Y572 518 aa12.08□□□□□ -0.48
COL25A1-204ENST00000494183 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 PAEPP09466 180 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 SOX11P35716 441 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 AP2B1P63010 937 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 ACTN3Q08043 901 aaPredicted RBP12.07□□□□□ -0.48
COL25A1-204ENST00000494183 CAPSQ13938 189 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 ILDR2Q71H61 639 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 NUP93Q8N1F7 819 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 UCMAQ8WVF2 138 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 FAM129AQ9BZQ8 928 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 HEATR9A2RTY3 570 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 SUPT7LO94864 414 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 CALCAP01258 141 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 MLH1P40692 756 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 MARC1Q5VT66 337 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 RRM2BQ7LG56 351 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 CCNJLQ8IV13 435 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 SMARCD1Q96GM5 515 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 SYT17Q9BSW7 474 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 SHCBP1LQ9BZQ2 653 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 MANSC1Q9H8J5 431 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 ZSCAN5CA6NGD5 496 aaPredicted RBP12.07□□□□□ -0.48
COL25A1-204ENST00000494183 HMGCRP04035 888 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 AMPD1P23109 780 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 SH3BGRP55822 239 aaPredicted RBP12.07□□□□□ -0.48
COL25A1-204ENST00000494183 ABCE1P61221 599 aaKnown RBP12.07□□□□□ -0.48
COL25A1-204ENST00000494183 RHOAP61586 193 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 ITGB3BPQ13352 177 aaPredicted RBP12.07□□□□□ -0.48
COL25A1-204ENST00000494183 LRRC55Q6ZSA7 311 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 ANO5Q75V66 913 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 COLGALT1Q8NBJ5 622 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 TBCBQ99426 244 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 SYNDIG1Q9H7V2 258 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 PDGFCQ9NRA1 345 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 L1RE1Q9UN81 338 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 CDY2AQ9Y6F7 541 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 F8VP50 259 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 AIM2O14862 343 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 MAFO75444 373 aaPredicted RBP12.07□□□□□ -0.48
COL25A1-204ENST00000494183 ADRB2P07550 413 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
COL25A1-204ENST00000494183 KIRREL3Q8IZU9 778 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms