RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 NDRG1Q92597 394 aaKnown RBP15.29■□□□□ 0.04
BRCA1-223ENST00000494123 TRPC7Q9HCX4 862 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 ADAM22Q9P0K1 906 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 TJP2Q9UDY2 1190 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 EYSQ5T1H1 3165 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 NCANO14594 1321 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 A0A087X0T9 212 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 A0A1W2PQH9 124 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 ZNF840PA6NDX5 716 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 PAPSS1O43252 624 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 RTN2O75298 545 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 TADA3O75528 432 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 FAM228BP0C875 321 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 MMP8P22894 467 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 GABRB2P47870 512 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 SMAD2Q15796 467 aaKnown RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 C2CD6Q53TS8 623 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 BTBD8Q5XKL5 378 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 FAM183BPQ6ZVS7 135 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 PHF13Q86YI8 300 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 OLIG1Q8TAK6 271 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 CLEC4CQ8WTT0 213 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 FAM149B1Q96BN6 582 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 TAS2R14Q9NYV8 317 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.28■□□□□ 0.047e-7■□□□□ 9.9
BRCA1-223ENST00000494123 STRIP2Q9ULQ0 834 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 DENND4CQ5VZ89 1909 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 YJEFN3A6XGL0 299 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 E7ENQ6 273 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 MOSPD3O75425 235 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 RALAP11233 206 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 DDX6P26196 483 aaKnown RBP eCLIP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 GFPT1Q06210 699 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 SLC18A3Q16572 532 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 CCDC122Q5T0U0 273 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 TXNDC8Q6A555 127 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 ALKBH5Q6P6C2 394 aaKnown RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 OTOP3Q7RTS5 596 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 TMTC1Q8IUR5 882 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 FGF13Q92913 245 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 ACSF2Q96CM8 615 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 BAG1Q99933 345 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-223ENST00000494123 NACA2Q9H009 215 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 NMUR1Q9HB89 426 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 ZMYM5Q9UJ78 669 aa15.28■□□□□ 0.04
BRCA1-223ENST00000494123 ANAPC1Q9H1A4 1944 aa15.27■□□□□ 0.04
BRCA1-223ENST00000494123 GOLGA8SH3BPF8 625 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 LTFP02788 710 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 FTLP02792 175 aaPredicted RBP15.27■□□□□ 0.03
BRCA1-223ENST00000494123 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 IL9P15248 144 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 SP100P23497 879 aaPredicted RBP15.27■□□□□ 0.03
BRCA1-223ENST00000494123 SLC6A3Q01959 620 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 EFHC1Q5JVL4 640 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 HECTD3Q5T447 861 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 STXBP5Q5T5C0 1151 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 FAM102AQ5T9C2 384 aaPredicted RBP15.27■□□□□ 0.03
BRCA1-223ENST00000494123 SNX30Q5VWJ9 437 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 MON1BQ7L1V2 547 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 RSRC2Q7L4I2 434 aaKnown RBP15.27■□□□□ 0.03
BRCA1-223ENST00000494123 SCD5Q86SK9 330 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 TADA2BQ86TJ2 420 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 XYLT1Q86Y38 959 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 NPAS3Q8IXF0 933 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 MAB21L3Q8N8X9 362 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 MCRS1Q96EZ8 462 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 TRIM11Q96F44 468 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 TRIM62Q9BVG3 475 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.03
BRCA1-223ENST00000494123 TASP1Q9H6P5 420 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 ABCC13Q9NSE7 274 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 CLIC5Q9NZA1 410 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 WDR35Q9P2L0 1181 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 CDH7Q9ULB5 785 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 NR2E1Q9Y466 385 aa15.27■□□□□ 0.03
BRCA1-223ENST00000494123 TRAV19A0A0A6YYK7 116 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 C2orf78A6NCI8 922 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 SOBPA7XYQ1 873 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 NRG2O14511 850 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 CAPN9O14815 690 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 TLR5O60602 858 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 PTMAP06454 111 aaKnown RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 CKMP06732 381 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 RARGP13631 454 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 CYLC1P35663 651 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 AVPR1AP37288 418 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 PGFP49763 221 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 KCNQ1P51787 676 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 ZNF268Q14587 947 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 ASTE1Q2TB18 679 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 BSPRYQ5W0U4 402 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 OLFML1Q6UWY5 402 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 BHLHA9Q7RTU4 235 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 PHLDB2Q86SQ0 1253 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 CCDC170Q8IYT3 715 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 MCOLN2Q8IZK6 566 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 RNF139Q8WU17 664 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms