RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-212ENST00000493940 K7EQS6 105 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 RNF40O75150 1001 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 FAM200BP0CF97 657 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 PFKLP17858 780 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 ACO1P21399 889 aaKnown RBP13.32□□□□□ -0.28
HSPG2-212ENST00000493940 FMO5P49326 533 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 CCR3P51677 355 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 KIF11P52732 1056 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 LRRC32Q14392 662 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 DHCR24Q15392 516 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 LPAL2Q16609 132 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 HECTD3Q5T447 861 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 HEATR6Q6AI08 1181 aaKnown RBP13.32□□□□□ -0.28
HSPG2-212ENST00000493940 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 TTC30AQ86WT1 665 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 BBS7Q8IWZ6 715 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 KIAA2013Q8IYS2 634 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 ATP2A3Q93084 1043 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 CCDC34Q96HJ3 373 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 TMEM176AQ96HP8 235 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 P2RY13Q9BPV8 354 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 KLF16Q9BXK1 252 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-212ENST00000493940 DUSP16Q9BY84 665 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 DLL3Q9NYJ7 618 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 ARMCX3Q9UH62 379 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-212ENST00000493940 SCML2Q9UQR0 700 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 PCDHGA2Q9Y5H1 932 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 USP3Q9Y6I4 520 aa13.32□□□□□ -0.28
HSPG2-212ENST00000493940 PSMA7O14818 248 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 TRIM24O15164 1050 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 TLR5O60602 858 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 PAPSS2O95340 614 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-212ENST00000493940 IRF1P10914 325 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 TGM1P22735 817 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 CUL2Q13617 745 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 EMC10Q5UCC4 262 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 C1orf228Q6PIY5 440 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 BHLHA9Q7RTU4 235 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 ARHGEF19Q8IW93 802 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 TRIM59Q8IWR1 403 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 ATRIPQ8WXE1 791 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 TFAP2BQ92481 460 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 CD101Q93033 1021 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 CEP63Q96MT8 703 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 SRRTQ9BXP5 876 aaKnown RBP13.31□□□□□ -0.28
HSPG2-212ENST00000493940 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 ZDHHC4Q9NPG8 344 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 COMMD8Q9NX08 183 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 EHD2Q9NZN4 543 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 PI4KAP42356 2102 aa13.31□□□□□ -0.28
HSPG2-212ENST00000493940 TNRC6BQ9UPQ9 1833 aaKnown RBP13.3□□□□□ -0.28
HSPG2-212ENST00000493940 HNRNPLP14866 589 aaKnown RBP eCLIP13.3□□□□□ -0.28
HSPG2-212ENST00000493940 UBE2HP62256 183 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 GRSF1Q12849 480 aaKnown RBP eCLIP13.3□□□□□ -0.28
HSPG2-212ENST00000493940 RAB41Q5JT25 222 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 LY6G5CQ5SRR4 150 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 ARHGAP17Q68EM7 881 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 PIGZQ86VD9 579 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 TMEM25Q86YD3 366 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 IRF2BP1Q8IU81 584 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 PHTF2Q8N3S3 785 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 RPLP0P6Q8NHW5 317 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 UBA3Q8TBC4 463 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 IER2Q9BTL4 223 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 CYLDQ9NQC7 956 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
HSPG2-212ENST00000493940 KIAA1468Q9P260 1216 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 HOOK1Q9UJC3 728 aaKnown RBP13.3□□□□□ -0.28
HSPG2-212ENST00000493940 HCN2Q9UL51 889 aa13.3□□□□□ -0.28
HSPG2-212ENST00000493940 PLXND1Q9Y4D7 1925 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 E2F8A0AVK6 867 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 STX10O60499 249 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 RARGP13631 454 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 DRD1P21728 446 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 TUBP50607 506 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 PDE6CP51160 858 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 SEC13P55735 322 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 APBA1Q02410 837 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 PDE4CQ08493 712 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 KCNH2Q12809 1159 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 PKDCCQ504Y2 493 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 RRAGAQ7L523 313 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 NAT16Q8N8M0 369 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 FAXDC2Q96IV6 333 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 KREMEN1Q96MU8 473 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 FBXO44Q9H4M3 255 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 PARD6AQ9NPB6 346 aa13.29□□□□□ -0.28
HSPG2-212ENST00000493940 TLR8Q9NR97 1041 aaKnown RBP13.29□□□□□ -0.28
HSPG2-212ENST00000493940 SMG5Q9UPR3 1016 aaKnown RBP13.29□□□□□ -0.28
HSPG2-212ENST00000493940 SPTBN2O15020 2390 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 PMM2O15305 246 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 NFATC1O95644 943 aa13.28□□□□□ -0.28
HSPG2-212ENST00000493940 KLKB1P03952 638 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms