RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 CHRNB1P11230 501 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 TNNI1P19237 187 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SDHBP21912 280 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 ACAT1P24752 427 aaKnown RBP8.07□□□□□ -1.12
RBM39-238ENST00000493853 ME1P48163 572 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SOX9P48436 509 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 NLRP12P59046 1061 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 DOC2BQ14184 412 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 PON2Q15165 354 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 DDR2Q16832 855 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 LMBRD2Q68DH5 695 aaPredicted RBP8.07□□□□□ -1.12
RBM39-238ENST00000493853 C4orf50Q6ZRC1 276 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 PRR23BQ6ZRT6 265 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 DPH6Q7L8W6 267 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 HS2ST1Q7LGA3 356 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 DGLUCYQ7Z3D6 616 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 ADGRF2Q8IZF7 708 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SPEM1Q8N4L4 309 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 TOP6BLQ8N6T0 577 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SUMF1Q8NBK3 374 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SPATA18Q8TC71 538 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 RSPRY1Q96DX4 576 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 HPDLQ96IR7 371 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SLC46A2Q9BY10 475 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 MTMR12Q9C0I1 747 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SMG9Q9H0W8 520 aaKnown RBP8.07□□□□□ -1.12
RBM39-238ENST00000493853 TRPC7Q9HCX4 862 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 ABCB6Q9NP58 842 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 RBM12Q9NTZ6 932 aaKnown RBP8.07□□□□□ -1.12
RBM39-238ENST00000493853 TDP1Q9NUW8 608 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 INTS13Q9NVM9 706 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 GDAP2Q9NXN4 497 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 MAGEC2Q9UBF1 373 aaPredicted RBP8.07□□□□□ -1.12
RBM39-238ENST00000493853 SEPT3Q9UH03 358 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 USP18Q9UMW8 372 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 SMG5Q9UPR3 1016 aaKnown RBP8.07□□□□□ -1.12
RBM39-238ENST00000493853 CACNA1HO95180 2353 aa8.07□□□□□ -1.12
RBM39-238ENST00000493853 MTCL1Q9Y4B5 1905 aaKnown RBP8.07□□□□□ -1.12
RBM39-238ENST00000493853 PTPRZ1P23471 2315 aaPredicted RBP8.06□□□□□ -1.12
RBM39-238ENST00000493853 SHISA7A6NL88 538 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 J3QW42 95 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 ARNTLO00327 626 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 CLIC2O15247 247 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 EIF3DO15371 548 aaKnown RBP eCLIP8.06□□□□□ -1.12
RBM39-238ENST00000493853 POLR2DO15514 142 aaKnown RBP8.06□□□□□ -1.12
RBM39-238ENST00000493853 PHACTR2O75167 634 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 PRAMEF12O95522 483 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 CKMP06732 381 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 PDGFRBP09619 1106 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 CYP2F1P24903 491 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 ANXA13P27216 316 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 GRIK1P39086 918 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 GPR15P49685 360 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 SATB1Q01826 763 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 TNK2Q07912 1038 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 GRSF1Q12849 480 aaKnown RBP eCLIP8.06□□□□□ -1.12
RBM39-238ENST00000493853 TRPC3Q13507 836 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 RUNX3Q13761 415 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 PUM1Q14671 1186 aaKnown RBP eCLIP8.06□□□□□ -1.12
RBM39-238ENST00000493853 MAPRE1Q15691 268 aaKnown RBP8.06□□□□□ -1.12
RBM39-238ENST00000493853 LPAL2Q16609 132 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 FAM26FQ5R3K3 315 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 SDHAF4Q5VUM1 108 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 TXNDC8Q6A555 127 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 HEATR6Q6AI08 1181 aaKnown RBP8.06□□□□□ -1.12
RBM39-238ENST00000493853 CEP68Q76N32 757 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 MON1AQ86VX9 555 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 CBWD2Q8IUF1 395 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 WDR49Q8IV35 697 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 CEP57L1Q8IYX8 460 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 SYNPOQ8N3V7 929 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 LEO1Q8WVC0 666 aaPredicted RBP8.06□□□□□ -1.12
RBM39-238ENST00000493853 HPS3Q969F9 1004 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 NSUN5Q96P11 429 aaKnown RBP8.06□□□□□ -1.12
RBM39-238ENST00000493853 LRRC3BQ96PB8 259 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 FGFBP2Q9BYJ0 223 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 TRIM9Q9C026 710 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 EPC1Q9H2F5 836 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 SNX25Q9H3E2 840 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 KIF9Q9HAQ2 790 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 MAGEF1Q9HAY2 307 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 PRMT8Q9NR22 394 aaPredicted RBP8.06□□□□□ -1.12
RBM39-238ENST00000493853 TMLHEQ9NVH6 421 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 KBTBD4Q9NVX7 518 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 HSPBP1Q9NZL4 362 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
RBM39-238ENST00000493853 VWA8A3KMH1 1905 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 USP34Q70CQ2 3546 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 TRAV19A0A0A6YYK7 116 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 PRR5-ARHGAP8B1AHC4 643 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 ATG13O75143 517 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 GHRHP01286 108 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 USP17L7P0C7H9 530 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 ZSCAN22P10073 491 aaPredicted RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 HMGA1P17096 107 aaKnown RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 BDNFP23560 247 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 CNR2P34972 360 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 GNL1P36915 607 aaPredicted RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 AFMP43652 599 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 PDE6CP51160 858 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms