RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 FLT3P36888 993 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 YWHAGP61981 247 aaKnown RBP eCLIP20.32■□□□□ 0.84
USP39-218ENST00000493829 PPP1R15BQ5SWA1 713 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 TRNP1Q6NT89 227 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 Q7L0L9 218 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 SLC26A9Q7LBE3 791 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 DNAJB7Q7Z6W7 309 aaPredicted RBP20.32■□□□□ 0.84
USP39-218ENST00000493829 HS6ST3Q8IZP7 471 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 ELMOD1Q8N336 334 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 PSMG2Q969U7 264 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 APOL5Q9BWW9 433 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 IRX2Q9BZI1 471 aaPredicted RBP20.32■□□□□ 0.84
USP39-218ENST00000493829 GOLPH3Q9H4A6 298 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 NMUR1Q9HB89 426 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 HCFC1R1Q9NWW0 138 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 UVRAGQ9P2Y5 699 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 SCML2Q9UQR0 700 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 MTCH2Q9Y6C9 303 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 CAPN6Q9Y6Q1 641 aa20.32■□□□□ 0.84
USP39-218ENST00000493829 ZNF638Q14966 1978 aaKnown RBP20.31■□□□□ 0.84
USP39-218ENST00000493829 SIGLEC16A6NMB1 481 aa20.31■□□□□ 0.84
USP39-218ENST00000493829 HSF2BPO75031 334 aa20.31■□□□□ 0.84
USP39-218ENST00000493829 LTFP02788 710 aa20.31■□□□□ 0.84
USP39-218ENST00000493829 MSNP26038 577 aaKnown RBP20.31■□□□□ 0.84
USP39-218ENST00000493829 PM20D1Q6GTS8 502 aa20.31■□□□□ 0.84
USP39-218ENST00000493829 ITIH5Q86UX2 942 aa20.31■□□□□ 0.84
USP39-218ENST00000493829 GOLGA1Q92805 767 aa20.31■□□□□ 0.84
USP39-218ENST00000493829 KHSRPQ92945 711 aaKnown RBP eCLIP20.31■□□□□ 0.84
USP39-218ENST00000493829 ZNF512Q96ME7 567 aaPredicted RBP20.31■□□□□ 0.84
USP39-218ENST00000493829 CDCA3Q99618 268 aaPredicted RBP20.31■□□□□ 0.84
USP39-218ENST00000493829 A0A0A6YYK5 440 aaPredicted RBP20.3■□□□□ 0.84
USP39-218ENST00000493829 BTNL10A8MVZ5 291 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 SART1O43290 800 aaKnown RBP20.3■□□□□ 0.84
USP39-218ENST00000493829 GLP2RO95838 553 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 OGDHQ02218 1023 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 EFHC1Q5JVL4 640 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 ELMSAN1Q6PJG2 1045 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 EP400NLQ6ZTU2 488 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 SCD5Q86SK9 330 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 IRGQQ8WZA9 623 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 SLITRK1Q96PX8 696 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 CORO1BQ9BR76 489 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 TTLL2Q9BWV7 592 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 IL37Q9NZH6 218 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 TMEM59LQ9UK28 342 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 REV3LO60673 3130 aa20.3■□□□□ 0.84
USP39-218ENST00000493829 DAB1O75553 588 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 YWHAZP63104 245 aaKnown RBP20.29■□□□□ 0.84
USP39-218ENST00000493829 MESDQ14696 234 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 DAB2IPQ5VWQ8 1189 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 BSPRYQ5W0U4 402 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 TMC5Q6UXY8 1006 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 CPNE8Q86YQ8 564 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 DEFB106AQ8N104 65 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 RXFP2Q8WXD0 754 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 CEP295NLQ96MC4 621 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 CFAP57Q96MR6 1250 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 OSER1Q9NX31 292 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 NUDT5Q9UKK9 219 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 NAALADL1Q9UQQ1 740 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 HYOU1Q9Y4L1 999 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 CCDC195A0A1B0GUA6 201 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 TMEM191CA6NGB0 347 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 CAPN9O14815 690 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 MYL4P12829 197 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 NCAM1P13591 858 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 PSMA2P25787 234 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 ZNF252P-AS1Q0IIN9 211 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 CDO1Q16878 200 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 DCAF6Q58WW2 860 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 BTBD8Q5XKL5 378 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 ZNF662Q6ZS27 426 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 TPCN2Q8NHX9 752 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 CASP10Q92851 521 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 GAS2L1Q99501 681 aaPredicted RBP20.29■□□□□ 0.84
USP39-218ENST00000493829 POPDC2Q9HBU9 364 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 EHD2Q9NZN4 543 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 DPP7Q9UHL4 492 aa20.29■□□□□ 0.84
USP39-218ENST00000493829 SYNJ2BP-COX16A0A087WUM0 186 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 FAM92AA1XBS5 289 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 GOLGA6L9A6NEM1 432 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 BUB1BO60566 1050 aaPredicted RBP20.28■□□□□ 0.84
USP39-218ENST00000493829 C1RP00736 705 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 FYNP06241 537 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 PDGFRAP16234 1089 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 TFE3P19532 575 aaPredicted RBP20.28■□□□□ 0.84
USP39-218ENST00000493829 GPD1P21695 349 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 SCNN1AP37088 669 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 ATP11AP98196 1134 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 KCNC3Q14003 757 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 C15orf59Q2T9L4 293 aaPredicted RBP20.28■□□□□ 0.84
USP39-218ENST00000493829 RARS2Q5T160 578 aaKnown RBP20.28■□□□□ 0.84
USP39-218ENST00000493829 SYPL2Q5VXT5 272 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 SCML4Q8N228 414 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 EFHBQ8N7U6 833 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 ADAM32Q8TC27 787 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 HDAC7Q8WUI4 952 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 TRMT2BQ96GJ1 504 aaKnown RBP20.28■□□□□ 0.84
USP39-218ENST00000493829 ASAH2Q9NR71 780 aa20.28■□□□□ 0.84
USP39-218ENST00000493829 TLR8Q9NR97 1041 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms