RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 PDPK2PQ6A1A2 396 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 MTERF3Q96E29 417 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 ZFYVE28Q9HCC9 887 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 C6orf203Q9P0P8 240 aaPredicted RBP20.74■□□□□ 0.91
RNF40-203ENST00000493683 POLG2Q9UHN1 485 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 ENOPH1Q9UHY7 261 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 TK2O00142 265 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 SLC37A4O43826 429 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 LRRC71Q8N4P6 559 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 SENP2Q9HC62 589 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 TBC1D13Q9NVG8 400 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 NCOA3Q9Y6Q9 1424 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 CTSHP09668 335 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 CD44P16070 742 aaKnown RBP20.74■□□□□ 0.91
RNF40-203ENST00000493683 TCF7P36402 384 aaPredicted RBP20.74■□□□□ 0.91
RNF40-203ENST00000493683 SFSWAPQ12872 951 aaKnown RBP20.74■□□□□ 0.91
RNF40-203ENST00000493683 CDH18Q13634 790 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 ARHGAP17Q68EM7 881 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 SDE2Q6IQ49 451 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 GPRC5AQ8NFJ5 357 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 OSBPL10Q9BXB5 764 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 V9GYQ6 96 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 MADDQ8WXG6 1647 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 ITGALP20701 1170 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 PRKCQQ04759 706 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 GIT2Q14161 759 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 FBXO25Q8TCJ0 367 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 OSCP1Q8WVF1 389 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 COLEC11Q9BWP8 271 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 SPON1Q9HCB6 807 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 ADGRB3O60242 1522 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 PDZK1P1A8MUH7 402 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 TBL3Q12788 808 aaKnown RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 MAD2L1Q13257 205 aaPredicted RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 MTDHQ86UE4 582 aaKnown RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 GLMNQ92990 594 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 TBCBQ99426 244 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 TPBGLP0DKB5 382 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 NAB1Q13506 487 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 HDDC2Q7Z4H3 204 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 KYQ8NBH2 561 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 BLOC1S5Q8TDH9 187 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 ATG4AQ8WYN0 398 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 COMMD8Q9NX08 183 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 PRG3Q9Y2Y8 225 aaPredicted RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 TPST1O60507 370 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 SLC26A2P50443 739 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 ZBTB49Q6ZSB9 765 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 TDRD5Q8NAT2 981 aaKnown RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 UBXN6Q9BZV1 441 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 FAM58BPP0C7Q3 252 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 TKTP29401 623 aaKnown RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 MMP14P50281 582 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 PRKAA1Q13131 559 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 MPP3Q13368 585 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 C1DQ13901 141 aaKnown RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 OTOAQ7RTW8 1153 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 STRA8Q7Z7C7 330 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 FAM172AQ8WUF8 416 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 ZFRQ96KR1 1074 aaKnown RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 IARS2Q9NSE4 1012 aaKnown RBP20.73■□□□□ 0.91
RNF40-203ENST00000493683 AP1G2O75843 785 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 IRF1P10914 325 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 ZNF544Q6NX49 715 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 RRN3Q9NYV6 651 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 USP18Q9UMW8 372 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 DOLKQ9UPQ8 538 aa20.73■□□□□ 0.91
RNF40-203ENST00000493683 RGS5O15539 181 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 ATP6V1G2O95670 118 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 OR1G1P47890 313 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 OASLQ15646 514 aaKnown RBP20.72■□□□□ 0.91
RNF40-203ENST00000493683 FUT11Q495W5 492 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 STYK1Q6J9G0 422 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 ZFP1Q6P2D0 407 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 RPRD1AQ96P16 312 aaPredicted RBP20.72■□□□□ 0.91
RNF40-203ENST00000493683 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
RNF40-203ENST00000493683 CHI3L1P36222 383 aaPredicted RBP20.72■□□□□ 0.91
RNF40-203ENST00000493683 KPNA1P52294 538 aaPredicted RBP20.72■□□□□ 0.91
RNF40-203ENST00000493683 VCPIP1Q96JH7 1222 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 PPP1R10Q96QC0 940 aaKnown RBP20.72■□□□□ 0.91
RNF40-203ENST00000493683 CLPBQ9H078 707 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 COPG2Q9UBF2 871 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 BCORL1Q5H9F3 1711 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 IZUMO2Q6UXV1 221 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 SVOPQ8N4V2 548 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 OLFM1Q99784 485 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 AP4E1Q9UPM8 1137 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 MED24O75448 989 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 MKRN4PQ13434 485 aaPredicted RBP20.72■□□□□ 0.91
RNF40-203ENST00000493683 TAAR1Q96RJ0 339 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 PDGFCQ9NRA1 345 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 ZSCAN32Q9NX65 697 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 CYP39A1Q9NYL5 469 aa20.72■□□□□ 0.91
RNF40-203ENST00000493683 UBDO15205 165 aa20.71■□□□□ 0.91
RNF40-203ENST00000493683 SERPINE1P05121 402 aa20.71■□□□□ 0.91
RNF40-203ENST00000493683 CETPP11597 493 aa20.71■□□□□ 0.91
RNF40-203ENST00000493683 SOX11P35716 441 aa20.71■□□□□ 0.91
RNF40-203ENST00000493683 FAXCQ5TGI0 409 aa20.71■□□□□ 0.91
RNF40-203ENST00000493683 CBWD2Q8IUF1 395 aa20.71■□□□□ 0.91
RNF40-203ENST00000493683 CLEC10AQ8IUN9 316 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms