RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 EPN1Q9Y6I3 576 aaPredicted RBP18.07■□□□□ 0.48
LIME1-208ENST00000493265 TECTAO75443 2155 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
LIME1-208ENST00000493265 ATMINO43313 823 aaPredicted RBP18.06■□□□□ 0.48
LIME1-208ENST00000493265 NDUFA10O95299 355 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 GZMAP12544 262 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 MMP8P22894 467 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 SPA17Q15506 151 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 MON1BQ7L1V2 547 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 TMEM110Q86TL2 294 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 PHF13Q86YI8 300 aaPredicted RBP18.06■□□□□ 0.48
LIME1-208ENST00000493265 MCOLN2Q8IZK6 566 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 ZNF653Q96CK0 615 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 MSLNLQ96KJ4 702 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 CEP295NLQ96MC4 621 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 DESI2Q9BSY9 194 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 EHD2Q9NZN4 543 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 MYO1AQ9UBC5 1043 aa18.06■□□□□ 0.48
LIME1-208ENST00000493265 ZNF263O14978 683 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 GRAP2O75791 330 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 IPO7O95373 1038 aaKnown RBP18.05■□□□□ 0.48
LIME1-208ENST00000493265 CALB1P05937 261 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 RHOP08100 348 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 GJA1P17302 382 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 HOXB8P17481 243 aaPredicted RBP18.05■□□□□ 0.48
LIME1-208ENST00000493265 GABRR2P28476 465 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 DAOAP59103 153 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 CCZ1BP86790 482 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 CCZ1P86791 482 aaPredicted RBP18.05■□□□□ 0.48
LIME1-208ENST00000493265 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
LIME1-208ENST00000493265 PABPC1LQ4VXU2 614 aaKnown RBP18.05■□□□□ 0.48
LIME1-208ENST00000493265 XYLT1Q86Y38 959 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 ACRBPQ8NEB7 543 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 FAM149B1Q96BN6 582 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 SLITRK1Q96PX8 696 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 TTLL2Q9BWV7 592 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 PACSIN1Q9BY11 444 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 ISCUQ9H1K1 167 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 CYLDQ9NQC7 956 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 CNGB3Q9NQW8 809 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 SCML2Q9UQR0 700 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 USP3Q9Y6I4 520 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 MYO16Q9Y6X6 1858 aa18.05■□□□□ 0.48
LIME1-208ENST00000493265 A0A1W2PQH9 124 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 YJEFN3A6XGL0 299 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 EIF3CLB5ME19 914 aaKnown RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 E7ENQ6 273 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 FBXO21O94952 628 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 GJB6O95452 261 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 MAGEA1P43355 309 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 GABRB2P47870 512 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 RPL34P49207 117 aaKnown RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 PGFP49763 221 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 GALCP54803 685 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 RNASE9P60153 205 aaKnown RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 PTP4A2Q12974 167 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 TAF5Q15542 800 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 FAM102AQ5T9C2 384 aaPredicted RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 CES5AQ6NT32 575 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 PPP1R2P3Q6NXS1 205 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 TOGARAM2Q6ZUX3 1019 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 PDZD4Q76G19 769 aaPredicted RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 GPR149Q86SP6 731 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 TMC8Q8IU68 726 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 CMASQ8NFW8 434 aaPredicted RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 TCEAL4Q96EI5 215 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 TRMT2BQ96GJ1 504 aaKnown RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 PIWIL1Q96J94 861 aaKnown RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 GCNAQ96QF7 691 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 EIF3CQ99613 913 aaKnown RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 KCNH6Q9H252 994 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 COMMD8Q9NX08 183 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 IL37Q9NZH6 218 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 TRPM5Q9NZQ8 1165 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 UXTQ9UBK9 157 aaPredicted RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 CNOT8Q9UFF9 292 aaKnown RBP18.04■□□□□ 0.48
LIME1-208ENST00000493265 STRIP2Q9ULQ0 834 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 NENFQ9UMX5 172 aa18.04■□□□□ 0.48
LIME1-208ENST00000493265 A0A1W2PRU2 124 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 ARHGAP6O43182 974 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 H2AFZP0C0S5 128 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 RRM1P23921 792 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 YWHAGP61981 247 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIME1-208ENST00000493265 CYP4F8P98187 520 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 SLC6A3Q01959 620 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 DNAJC24Q6P3W2 148 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 H2AFVQ71UI9 128 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 SMRP1Q8NCR6 262 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 ING5Q8WYH8 240 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 EDEM1Q92611 657 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 GOLGA1Q92805 767 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 EDAQ92838 391 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 MYRFLQ96LU7 910 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 LRRC3Q9BY71 257 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 THAP2Q9H0W7 228 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 ADAM7Q9H2U9 754 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 ATXN3LQ9H3M9 355 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 IL21Q9HBE4 155 aa18.03■□□□□ 0.48
LIME1-208ENST00000493265 TRPC7Q9HCX4 862 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms