RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 APEX2Q9UBZ4 518 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 CPQQ9Y646 472 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 WNT6Q9Y6F9 365 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 PIAS3Q9Y6X2 628 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 GREB1Q4ZG55 1949 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 MAN2B1O00754 1011 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 SCAMP3O14828 347 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 XPO1O14980 1071 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 MDM4O15151 490 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 TLR5O60602 858 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 MBL2P11226 248 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CHRNB1P11230 501 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 TRIM21P19474 475 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CTHP32929 405 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 PLA2G4AP47712 749 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 PDE6CP51160 858 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 TKTL1P51854 596 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 KPNA1P52294 538 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 BCAT1P54687 386 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 TYRO3Q06418 890 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 BST2Q10589 180 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 GAS6Q14393 721 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 UBXN2BQ14CS0 331 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 KRT31Q15323 416 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 STX1AQ16623 288 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 ARHGAP44Q17R89 818 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 GAB4Q2WGN9 574 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 ITPRIPL2Q3MIP1 535 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 KLHDC7AQ5VTJ3 777 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 PM20D1Q6GTS8 502 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CAVIN1Q6NZI2 390 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 PMF1Q6P1K2 205 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 DENND1BQ6P3S1 775 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 APTXQ7Z2E3 356 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 FAM114A1Q8IWE2 563 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 ADGRG2Q8IZP9 1017 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 ZNF276Q8N554 614 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CSGALNACT1Q8TDX6 532 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 KCTD13Q8WZ19 329 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 SHC3Q92529 594 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 SECISBP2LQ93073 1101 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 NELL2Q99435 816 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 PHOX2BQ99453 314 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 NAA15Q9BXJ9 866 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 KLF16Q9BXK1 252 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 DNAI2Q9GZS0 605 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 C8orf33Q9H7E9 229 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 ECT2Q9H8V3 914 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CYLDQ9NQC7 956 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 TLR8Q9NR97 1041 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 DUS2Q9NX74 493 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 TAB2Q9NYJ8 693 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CFAP97Q9P2B7 532 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CYTH4Q9UIA0 394 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 DNAJC12Q9UKB3 198 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 NUDT5Q9UKK9 219 aa7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 NDRG2Q9UN36 371 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 PTPRZ1P23471 2315 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1-204ENST00000492511 CFAP54Q96N23 3096 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 LRRC10BA6NIK2 292 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 H0Y858 1186 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 FOXN3O00409 490 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 ZBED1O96006 694 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 PNMA6AP0CW24 399 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 SETSIPP0DME0 302 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 RARGP13631 454 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 KRT5P13647 590 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 ZNF18P17022 549 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 EEF1GP26641 437 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 GJA4P35212 333 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 CLCN1P35523 988 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 GPD2P43304 727 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 RPS9P46781 194 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 RPL34P49207 117 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 RGS7P49802 495 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 KLK7P49862 253 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 GALK1P51570 392 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 MFAP3P55082 362 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 PON2Q15165 354 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 PDGFRLQ15198 375 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 ANO6Q4KMQ2 910 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 CC2D1AQ6P1N0 951 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 KLHDC10Q6PID8 442 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 RHBDF2Q6PJF5 856 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 ENOSF1Q7L5Y1 443 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 RALGPS2Q86X27 583 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 C1orf210Q8IVY1 113 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 WDTC1Q8N5D0 677 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 KIAA1958Q8N8K9 716 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 TTC16Q8NEE8 873 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 CLEC4CQ8WTT0 213 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 ZNF606Q8WXB4 792 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 EZH1Q92800 747 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 P2RY11Q96G91 374 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 MSANTD3Q96H12 275 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 ULBP1Q9BZM6 244 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 VPS16Q9H269 839 aa7.56□□□□□ -1.2
PDLIM1-204ENST00000492511 LMAN1LQ9HAT1 526 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms