RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-210	ENST00000491729	NECAB2	Q7Z6G3	386 aa		13.76	□□□□□ -0.21
LSS-210	ENST00000491729	TDRP	Q86YL5	185 aa		13.76	□□□□□ -0.21
LSS-210	ENST00000491729	CKAP2	Q8WWK9	683 aa		13.76	□□□□□ -0.21
LSS-210	ENST00000491729	NKD2	Q969F2	451 aa	Predicted RBP	13.76	□□□□□ -0.21
LSS-210	ENST00000491729	SEZ6L	Q9BYH1	1024 aa		13.76	□□□□□ -0.21
LSS-210	ENST00000491729	PCDH9	Q9HC56	1237 aa		13.76	□□□□□ -0.21
LSS-210	ENST00000491729	SLC12A4	Q9UP95	1085 aa		13.76	□□□□□ -0.21
LSS-210	ENST00000491729	ZNF148	Q9UQR1	794 aa		13.76	□□□□□ -0.21
LSS-210	ENST00000491729	hCG_1818297	A0A087WSY0	165 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	PIR	O00625	290 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	CXCL10	P02778	98 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	KRT7	P08729	469 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	CLTB	P09497	229 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	CSF2RA	P15509	400 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	MAGEA4	P43358	317 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	VCP	P55072	806 aa	Known RBP	13.75	□□□□□ -0.21
LSS-210	ENST00000491729	GSC	P56915	257 aa	Predicted RBP	13.75	□□□□□ -0.21
LSS-210	ENST00000491729	RPL7A	P62424	266 aa	Known RBP	13.75	□□□□□ -0.21
LSS-210	ENST00000491729	CD300LG	Q6UXG3	332 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	PCGF5	Q86SE9	256 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	ERICH1	Q86X53	443 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	ZNF280B	Q86YH2	543 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	TTC13	Q8NBP0	860 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	FNIP1	Q8TF40	1166 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	HPDL	Q96IR7	371 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	TWNK	Q96RR1	684 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	ELAC2	Q9BQ52	826 aa	Known RBP	13.75	□□□□□ -0.21
LSS-210	ENST00000491729	EURL	Q9NYK6	297 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	TPX2	Q9ULW0	747 aa	Known RBP	13.75	□□□□□ -0.21
LSS-210	ENST00000491729	INPP5F	Q9Y2H2	1132 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	USP15	Q9Y4E8	981 aa	Predicted RBP	13.75	□□□□□ -0.21
LSS-210	ENST00000491729	CFAP73	A6NFT4	308 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	MNAT1	P51948	309 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	ZNF252P-AS1	Q0IIN9	211 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	ZNF394	Q53GI3	561 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	MFSD7	Q6UXD7	560 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	SLC24A5	Q71RS6	500 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	ANKS1B	Q7Z6G8	1248 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	GRAMD1A	Q96CP6	724 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	MAGEB18	Q96M61	343 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	LPIN3	Q9BQK8	851 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	LHX5	Q9H2C1	402 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	KCNK9	Q9NPC2	374 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	WDR35	Q9P2L0	1181 aa		13.75	□□□□□ -0.21
LSS-210	ENST00000491729	EXOC1L	A0A1B0GW35	172 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	SMAP	O00193	183 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	ITGB1	P05556	798 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	BRD2	P25440	801 aa	Known RBP	13.74	□□□□□ -0.21
LSS-210	ENST00000491729	STX2	P32856	288 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	ARSE	P51690	589 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	SLC18A1	P54219	525 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	RASA2	Q15283	850 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	OASL	Q15646	514 aa	Known RBP	13.74	□□□□□ -0.21
LSS-210	ENST00000491729	CYB5D1	Q6P9G0	228 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	C16orf59	Q7L2K0	433 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	FUK	Q8N0W3	1084 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	RSAD1	Q9HA92	442 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.74	□□□□□ -0.21
LSS-210	ENST00000491729	DNAJC17	Q9NVM6	304 aa	Known RBP	13.74	□□□□□ -0.21
LSS-210	ENST00000491729	DNPEP	Q9ULA0	475 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	DERA	Q9Y315	318 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	CHD7	Q9P2D1	2997 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	TANC1	Q9C0D5	1861 aa		13.74	□□□□□ -0.21
LSS-210	ENST00000491729	LRRD1	A4D1F6	860 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	CASTOR2	A6NHX0	329 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	TCP11X1	B4DZS4	312 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	CHUK	O15111	745 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	DDHD2	O94830	711 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	ACR	P10323	421 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	CDKN2B	P42772	138 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	CLCNKB	P51801	687 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	RBP5	P82980	135 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	HADH	Q16836	314 aa	Known RBP	13.73	□□□□□ -0.21
LSS-210	ENST00000491729	KAZN	Q674X7	775 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	CENPU	Q71F23	418 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	BCO2	Q9BYV7	579 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	SAYSD1	Q9NPB0	183 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	CTNNAL1	Q9UBT7	734 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	ITGA11	Q9UKX5	1188 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	NAALADL1	Q9UQQ1	740 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	GIT1	Q9Y2X7	761 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	PI4K2B	G5E9Z4	385 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	GTF2A1	P52655	376 aa	Predicted RBP	13.73	□□□□□ -0.21
LSS-210	ENST00000491729	IL9R	Q01113	521 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	SNCB	Q16143	134 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	CCDC142	Q17RM4	750 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	SOWAHA	Q2M3V2	549 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	PAN2	Q504Q3	1202 aa	Known RBP	13.73	□□□□□ -0.21
LSS-210	ENST00000491729	NUGGC	Q68CJ6	796 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.73	□□□□□ -0.21
LSS-210	ENST00000491729	ANKRD42	Q8N9B4	389 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	MGARP	Q8TDB4	240 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	TFAP2B	Q92481	460 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	C9orf72	Q96LT7	481 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	TGS1	Q96RS0	853 aa	Known RBP	13.73	□□□□□ -0.21
LSS-210	ENST00000491729	MRPL45	Q9BRJ2	306 aa	Known RBP	13.73	□□□□□ -0.21
LSS-210	ENST00000491729	VRTN	Q9H8Y1	702 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	FGFR1OP2	Q9NVK5	253 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	KLHL11	Q9NVR0	708 aa		13.73	□□□□□ -0.21
LSS-210	ENST00000491729	FETUB	Q9UGM5	382 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms