RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ARHGAP26Q9UNA1 814 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 NUP205Q92621 2012 aa11.69□□□□□ -0.54
TMEM39A-211ENST00000491685 SDK1Q7Z5N4 2213 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 ZNF840PA6NDX5 716 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 KCNJ18B7U540 433 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 LEFTY2O00292 366 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 PES1O00541 588 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 PMM2O15305 246 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 TACC1O75410 805 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 OLFM2O95897 454 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 AFPP02771 609 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 TCF3P15923 654 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 HDCP19113 662 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 CNR2P34972 360 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 OPRD1P41143 372 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 PIK3CAP42336 1068 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 GCLMP48507 274 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 CDH8P55286 799 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 TNNC1P63316 161 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 MESP2Q0VG99 397 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 KCNH2Q12809 1159 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 IFRD2Q12894 506 aaPredicted RBP11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 NCOA4Q13772 614 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 KCNJ12Q14500 433 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 WDR72Q3MJ13 1102 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 ZNF667Q5HYK9 610 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 PPM1JQ5JR12 505 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 VSTM1Q6UX27 236 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 SCARA5Q6ZMJ2 495 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 CEP68Q76N32 757 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 KBTBD6Q86V97 674 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 SFTPA1Q8IWL2 248 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 TTC39CQ8N584 583 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 FBXL13Q8NEE6 735 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 RPLP0P6Q8NHW5 317 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 CCDC26Q8TAB7 109 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 NETO1Q8TDF5 533 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 GAB3Q8WWW8 586 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 CD101Q93033 1021 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 ATP2A3Q93084 1043 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 CNOT6LQ96LI5 555 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 FAM81BQ96LP2 452 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 SNX25Q9H3E2 840 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 TSPY26PQ9H489 355 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 SMOC1Q9H4F8 434 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 RAB20Q9NX57 234 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 SMPD4Q9NXE4 827 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 FAM208BQ5VWN6 2430 aa11.68□□□□□ -0.54
TMEM39A-211ENST00000491685 SLC30A4O14863 429 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TRIM66O15016 1216 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 AXIN1O15169 862 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 FOXD2O60548 495 aaPredicted RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 LRP3O75074 770 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 RPP40O75818 363 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 VNN1O95497 513 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 STAU1O95793 577 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 OAS1P00973 400 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 CYP17A1P05093 508 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TRIM49P0CI25 452 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TRIM49CP0CI26 452 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 PTPN1P18031 435 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 ANXA13P27216 316 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 MXI1P50539 228 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 PPP3CAQ08209 521 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TAF10Q12962 218 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 ORC1Q13415 861 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 SF3A2Q15428 464 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 CSRP2Q16527 193 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 MAN2A1Q16706 1144 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TCP11X2Q5H9J9 407 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 FKBP15Q5T1M5 1219 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 LRSAM1Q6UWE0 723 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 PAQR9Q6ZVX9 377 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TRIM59Q8IWR1 403 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 B3GALNT2Q8NCR0 500 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 RXFP3Q9NSD7 469 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 SAMSN1Q9NSI8 373 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 TRPM5Q9NZQ8 1165 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 HMGXB4Q9UGU5 601 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 SLC8A2Q9UPR5 921 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 CPQQ9Y646 472 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 THADAQ6YHU6 1953 aa11.67□□□□□ -0.54
TMEM39A-211ENST00000491685 PLXND1Q9Y4D7 1925 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 A8MXQ7 604 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 DCLK1O15075 740 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 ATG13O75143 517 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 EPN2O95208 641 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 ABL1P00519 1130 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 HLA-DRAP01903 254 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 CHRM1P11229 460 aaPredicted RBP11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 DRD1P21728 446 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 FMO5P49326 533 aa11.66□□□□□ -0.54
TMEM39A-211ENST00000491685 SEC13P55735 322 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms