RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 SCAMP3O14828 347 aaKnown RBP15.9■□□□□ 0.14
USP39-217ENST00000491659 ATG13O75143 517 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 PAPSS2O95340 614 aaPredicted RBP15.9■□□□□ 0.14
USP39-217ENST00000491659 ADH1CP00326 375 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 EGFP01133 1207 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 CYP17A1P05093 508 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 IRF1P10914 325 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 TDGF1P13385 188 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 GALK1P51570 392 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 BCAT1P54687 386 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 KCNH2Q12809 1159 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 GOLGA7BQ2TAP0 167 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 FBXO43Q4G163 708 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 CCDC186Q7Z3E2 898 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 TADA2BQ86TJ2 420 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 UBR7Q8N806 425 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 ANKRD52Q8NB46 1076 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 ZBTB44Q8NCP5 570 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 NELL1Q92832 810 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 OTUB2Q96DC9 234 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 ZFRQ96KR1 1074 aaKnown RBP15.9■□□□□ 0.14
USP39-217ENST00000491659 NUP62CLQ9H1M0 184 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 CYLDQ9NQC7 956 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 NAGPAQ9UK23 515 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 TSPAN16Q9UKR8 245 aa15.9■□□□□ 0.14
USP39-217ENST00000491659 ZFHX2Q9C0A1 2572 aaPredicted RBP15.89■□□□□ 0.13
USP39-217ENST00000491659 A0A1W2PQH9 124 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 RALAP11233 206 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 VDRP11473 427 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 ATP5C1P36542 298 aaKnown RBP15.89■□□□□ 0.13
USP39-217ENST00000491659 TMEM270Q6UE05 265 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 PIGZQ86VD9 579 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 MLKLQ8NB16 471 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 CNOT6LQ96LI5 555 aaKnown RBP15.89■□□□□ 0.13
USP39-217ENST00000491659 CDK5RAP1Q96SZ6 601 aaKnown RBP15.89■□□□□ 0.13
USP39-217ENST00000491659 UBXN6Q9BZV1 441 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 KIAA1257Q9ULG3 409 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 PCDHB4Q9Y5E5 795 aa15.89■□□□□ 0.13
USP39-217ENST00000491659 XPO1O14980 1071 aaKnown RBP15.88■□□□□ 0.13
USP39-217ENST00000491659 LILRB5O75023 590 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 RNF40O75150 1001 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 PAEPP09466 180 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 RARGP13631 454 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 PGFP49763 221 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 GCNT1Q02742 428 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 BST2Q10589 180 aaKnown RBP15.88■□□□□ 0.13
USP39-217ENST00000491659 DHCR24Q15392 516 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 TPD52L1Q16890 204 aaPredicted RBP15.88■□□□□ 0.13
USP39-217ENST00000491659 C10orf120Q5SQS8 335 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 NAIF1Q69YI7 327 aaPredicted RBP15.88■□□□□ 0.13
USP39-217ENST00000491659 TTC30AQ86WT1 665 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 CREBRFQ8IUR6 639 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 ARHGAP18Q8N392 663 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 EHBP1Q8NDI1 1231 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 CCDC26Q8TAB7 109 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 NMUR1Q9HB89 426 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.88■□□□□ 0.13
USP39-217ENST00000491659 DACH1Q9UI36 760 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 LSM7Q9UK45 103 aaKnown RBP15.88■□□□□ 0.13
USP39-217ENST00000491659 USP3Q9Y6I4 520 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 MYO15AQ9UKN7 3530 aa15.88■□□□□ 0.13
USP39-217ENST00000491659 TBX18O95935 607 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 SETSIPP0DME0 302 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 ADH5P11766 374 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 OPRD1P41143 372 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 TKTL1P51854 596 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 KLHDC10Q6PID8 442 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 CLEC17AQ6ZS10 378 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 BBS7Q8IWZ6 715 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 ADGRG2Q8IZP9 1017 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 LMO3Q8TAP4 145 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 ACDQ96AP0 544 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 KLF16Q9BXK1 252 aaPredicted RBP15.87■□□□□ 0.13
USP39-217ENST00000491659 INTS2Q9H0H0 1204 aaKnown RBP15.87■□□□□ 0.13
USP39-217ENST00000491659 LRRC4Q9HBW1 653 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 FBRSL1Q9HCM7 1045 aaKnown RBP15.87■□□□□ 0.13
USP39-217ENST00000491659 OSER1Q9NX31 292 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 CLIC5Q9NZA1 410 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 DNMT3LQ9UJW3 386 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 SLC8A2Q9UPR5 921 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 ATG2BQ96BY7 2078 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 MYOFQ9NZM1 2061 aa15.87■□□□□ 0.13
USP39-217ENST00000491659 USP34Q70CQ2 3546 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.86■□□□□ 0.13
USP39-217ENST00000491659 CHURC1-FNTBB4DL54 471 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 K7ESF4 209 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 O00370 1275 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 EIF2DP41214 584 aaKnown RBP15.86■□□□□ 0.13
USP39-217ENST00000491659 GAD2Q05329 585 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 PDE4CQ08493 712 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 STILQ15468 1287 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 GAB4Q2WGN9 574 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 RAB41Q5JT25 222 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 LY6G5CQ5SRR4 150 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 BTBD8Q5XKL5 378 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 PKN3Q6P5Z2 889 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 RRAGAQ7L523 313 aa15.86■□□□□ 0.13
USP39-217ENST00000491659 LONP2Q86WA8 852 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms