RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ANXA13P27216 316 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 DPP6P42658 865 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 IFRD2Q12894 506 aaPredicted RBP14.07□□□□□ -0.16
USF1-206ENST00000491629 BYSLQ13895 437 aaKnown RBP14.07□□□□□ -0.16
USF1-206ENST00000491629 MAPRE1Q15691 268 aaKnown RBP14.07□□□□□ -0.16
USF1-206ENST00000491629 EGFLAMQ63HQ2 1017 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 SYCP3Q8IZU3 236 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 PNPLA1Q8N8W4 532 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 TERB1Q8NA31 727 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 SCAMP5Q8TAC9 235 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 CEP76Q8TAP6 659 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 HPS3Q969F9 1004 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 P2RY11Q96G91 374 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 KCNK16Q96T55 309 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 CCSER2Q9H7U1 834 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 CHORDC1Q9UHD1 332 aaPredicted RBP14.07□□□□□ -0.16
USF1-206ENST00000491629 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 KALRNO60229 2985 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 TACC1O75410 805 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 BMP15O95972 392 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 GNL1P36915 607 aaPredicted RBP14.06□□□□□ -0.16
USF1-206ENST00000491629 GAD2Q05329 585 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 C10orf76Q5T2E6 689 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 TDRD10Q5VZ19 366 aaKnown RBP14.06□□□□□ -0.16
USF1-206ENST00000491629 HS2ST1Q7LGA3 356 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 TRAPPC11Q7Z392 1133 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 HDDC3Q8N4P3 179 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 TRIML1Q8N9V2 468 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 HSPA12BQ96MM6 686 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 MMS19Q96T76 1030 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 SPHK2Q9NRA0 654 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 PPP4R2Q9NY27 417 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 IL37Q9NZH6 218 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 TBC1D14Q9P2M4 693 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 CYP8B1Q9UNU6 501 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 STARD13Q9Y3M8 1113 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 KNTC1P50748 2209 aa14.06□□□□□ -0.16
USF1-206ENST00000491629 A0A1W2PQD8 194 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 PRRT4C9JH25 899 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 EIF5BO60841 1220 aaKnown RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 TNNC2P02585 160 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 ZDHHC11BP0C7U3 371 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 FTH1P19P0C7X4 201 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 HOXB2P14652 356 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 IDEP14735 1019 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 YWHAQP27348 245 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 NTSR1P30989 418 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 TRIP6Q15654 476 aaKnown RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 DUOXA2Q1HG44 320 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 ZNF423Q2M1K9 1284 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 COL28A1Q2UY09 1125 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 SNX30Q5VWJ9 437 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 RRAGBQ5VZM2 374 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 LARP1BQ659C4 914 aaKnown RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 SLC36A4Q6YBV0 504 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 CCNI2Q6ZMN8 369 aaPredicted RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 SV2BQ7L1I2 683 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 BRAPQ7Z569 592 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 SLCO6A1Q86UG4 719 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 DDX42Q86XP3 938 aaKnown RBP eCLIP14.05□□□□□ -0.16
USF1-206ENST00000491629 KCNV2Q8TDN2 545 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 IPO4Q8TEX9 1081 aaKnown RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 ADAMTS14Q8WXS8 1223 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 ZNF516Q92618 1163 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 OTUB2Q96DC9 234 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 ZNF419Q96HQ0 510 aaPredicted RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 BBC3Q96PG8 261 aaPredicted RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 SLITRK1Q96PX8 696 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 DUSP9Q99956 384 aaKnown RBP14.05□□□□□ -0.16
USF1-206ENST00000491629 PANK2Q9BZ23 570 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 DEC1Q9P2X7 70 aa14.05□□□□□ -0.16
USF1-206ENST00000491629 ASH1LQ9NR48 2969 aaKnown RBP14.04□□□□□ -0.16
USF1-206ENST00000491629 CFAP46Q8IYW2 2715 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 ZNF233A6NK53 670 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 WASH3PC4AMC7 463 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 CBFA2T3O75081 653 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 MAOBP27338 520 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 FAM173BQ6P4H8 233 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 TOGARAM2Q6ZUX3 1019 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 PDZD3Q86UT5 571 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 WDR49Q8IV35 697 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 NUP93Q8N1F7 819 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 B3GALNT2Q8NCR0 500 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 OR6B3Q8NGW1 331 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 MDM1Q8TC05 714 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 OVCA2Q8WZ82 227 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 FBXO32Q969P5 355 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 ELMO3Q96BJ8 720 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 GABRG3Q99928 467 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 ELOVL4Q9GZR5 314 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 XYLT2Q9H1B5 865 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 SNX25Q9H3E2 840 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 HSPBP1Q9NZL4 362 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 GMIPQ9P107 970 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms