RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 GTPBP2Q9BX10 602 aaKnown RBP11.82□□□□□ -0.52
NCSTN-214ENST00000491390 PRORYQ9H606 182 aa11.82□□□□□ -0.52
NCSTN-214ENST00000491390 POLMQ9NP87 494 aaPredicted RBP11.82□□□□□ -0.52
NCSTN-214ENST00000491390 OLFML3Q9NRN5 406 aa11.82□□□□□ -0.52
NCSTN-214ENST00000491390 TRPM5Q9NZQ8 1165 aa11.82□□□□□ -0.52
NCSTN-214ENST00000491390 CFAP97Q9P2B7 532 aa11.82□□□□□ -0.52
NCSTN-214ENST00000491390 CDH9Q9ULB4 789 aa11.82□□□□□ -0.52
NCSTN-214ENST00000491390 FRMD3A2A2Y4 597 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 SGK1O00141 431 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 KLF8O95600 359 aaPredicted RBP11.81□□□□□ -0.52
NCSTN-214ENST00000491390 CST3P01034 146 aaPredicted RBP11.81□□□□□ -0.52
NCSTN-214ENST00000491390 DLATP10515 647 aaKnown RBP11.81□□□□□ -0.52
NCSTN-214ENST00000491390 ANXA13P27216 316 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 TXLNAP40222 546 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 ATXN3P54252 364 aaPredicted RBP11.81□□□□□ -0.52
NCSTN-214ENST00000491390 TAF10Q12962 218 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 MYO1EQ12965 1108 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 DHCR24Q15392 516 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 DENND5BQ6ZUT9 1274 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 LIMS2Q7Z4I7 341 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 NAXDQ8IW45 347 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 OR6B3Q8NGW1 331 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 CCDC26Q8TAB7 109 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 WBP2Q969T9 261 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 SPATA17Q96L03 361 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 ZNF518BQ9C0D4 1074 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 TOR4AQ9NXH8 423 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 HSPBP1Q9NZL4 362 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 APOBEC2Q9Y235 224 aaKnown RBP11.81□□□□□ -0.52
NCSTN-214ENST00000491390 R3HCC1Q9Y3T6 440 aaKnown RBP11.81□□□□□ -0.52
NCSTN-214ENST00000491390 ADAMTS9Q9P2N4 1935 aa11.81□□□□□ -0.52
NCSTN-214ENST00000491390 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 ANKRD17O75179 2603 aaKnown RBP11.8□□□□□ -0.52
NCSTN-214ENST00000491390 ZNF233A6NK53 670 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 CLIC2O15247 247 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 MBL2P11226 248 aaPredicted RBP11.8□□□□□ -0.52
NCSTN-214ENST00000491390 WARSP23381 471 aaKnown RBP11.8□□□□□ -0.52
NCSTN-214ENST00000491390 CASP1P29466 404 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 ABCG1P45844 678 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 CYP2J2P51589 502 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 CYP4F3Q08477 520 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 DUOXA2Q1HG44 320 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 RHBDF2Q6PJF5 856 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 PCSK4Q6UW60 755 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 VSTM1Q6UX27 236 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 CCDC73Q6ZRK6 1079 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 TRAPPC11Q7Z392 1133 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 ADGRG2Q8IZP9 1017 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 NAT16Q8N8M0 369 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 IL17RCQ8NAC3 791 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 BAHD1Q8TBE0 780 aaPredicted RBP11.8□□□□□ -0.52
NCSTN-214ENST00000491390 MYCBPAPQ8TBZ2 947 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 WHAMMQ8TF30 809 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 HMGB4Q8WW32 186 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 SPACA7Q96KW9 195 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 SNX25Q9H3E2 840 aa11.8□□□□□ -0.52
NCSTN-214ENST00000491390 UPF2Q9HAU5 1272 aaKnown RBP11.8□□□□□ -0.52
NCSTN-214ENST00000491390 SHROOM3Q8TF72 1996 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 LRRK2Q5S007 2527 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
NCSTN-214ENST00000491390 TRIM66O15016 1216 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 TRIM24O15164 1050 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 ADAM23O75077 832 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 KAT7O95251 611 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 OAS1P00973 400 aaKnown RBP11.79□□□□□ -0.52
NCSTN-214ENST00000491390 IRF1P10914 325 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 TCF3P15923 654 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 SYT1P21579 422 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 GNL1P36915 607 aaPredicted RBP11.79□□□□□ -0.52
NCSTN-214ENST00000491390 WASP42768 502 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 SLC7A9P82251 487 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 ALCAMQ13740 583 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 BECN1Q14457 450 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 DPH6Q7L8W6 267 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 RABEPKQ7Z6M1 372 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 PGBD3Q8N328 593 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 SPATA18Q8TC71 538 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 ZNF516Q92618 1163 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 CCDC127Q96BQ5 260 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 TTLL2Q9BWV7 592 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 B3GNT5Q9BYG0 378 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 BCCIPQ9P287 314 aaKnown RBP eCLIP11.79□□□□□ -0.52
NCSTN-214ENST00000491390 NXF1Q9UBU9 619 aaKnown RBP11.79□□□□□ -0.52
NCSTN-214ENST00000491390 CHORDC1Q9UHD1 332 aaPredicted RBP11.79□□□□□ -0.52
NCSTN-214ENST00000491390 PCOLCE2Q9UKZ9 415 aa11.79□□□□□ -0.52
NCSTN-214ENST00000491390 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
NCSTN-214ENST00000491390 MUC22E2RYF6 1773 aaPredicted RBP11.78□□□□□ -0.52
NCSTN-214ENST00000491390 TCRBV21S2A2A0A5A6 115 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 TRABD2BA6NFA1 517 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 ARHGAP6O43182 974 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 MAP3K13O43283 966 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 TGFB1I1O43294 461 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 ALDH1A2O94788 518 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 CLSTN1O94985 981 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 APODP05090 189 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 ADH5P11766 374 aa11.78□□□□□ -0.52
NCSTN-214ENST00000491390 PTPN1P18031 435 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms