RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	ANO7	Q6IWH7	933 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	SCARA5	Q6ZMJ2	495 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	INTS8	Q75QN2	995 aa	Known RBP	18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	TRMT11	Q7Z4G4	463 aa	Known RBP	18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	CCDC33	Q8N5R6	958 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	IL17RC	Q8NAC3	791 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	OLIG1	Q8TAK6	271 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	SPATA32	Q96LK8	384 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	SMO	Q99835	787 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	LSM14B	Q9BX40	385 aa	Known RBP	18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	CYP3A43	Q9HB55	503 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	PNPLA8	Q9NP80	782 aa		18.97	■□□□□ 0.63
GGA1-223	ENST00000491295	FAM237A	A0A1B0GTK4	181 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	RHOBTB3	O94955	611 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	RPL13	P26373	211 aa	Known RBP	18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	SYK	P43405	635 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	KRT85	P78386	507 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	GOLGA8F	Q08AF8	430 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	GOLGA8DP	Q0D2H9	430 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	SPDYC	Q5MJ68	293 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	RNF43	Q68DV7	783 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	HTR3D	Q70Z44	454 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	ETFBKMT	Q8IXQ9	262 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	ALLC	Q8N6M5	410 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	TXNDC5	Q8NBS9	432 aa	Known RBP	18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	ZMIZ2	Q8NF64	920 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	MDGA1	Q8NFP4	955 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	SLC2A14	Q8TDB8	520 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	WHAMM	Q8TF30	809 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	FAXDC2	Q96IV6	333 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	HNRNPAB	Q99729	332 aa	Known RBP	18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	CCSER2	Q9H7U1	834 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	SPHK2	Q9NRA0	654 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	RXFP3	Q9NSD7	469 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	GMIP	Q9P107	970 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	DEC1	Q9P2X7	70 aa		18.96	■□□□□ 0.63
GGA1-223	ENST00000491295	TLR5	O60602	858 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	HLA-DRA	P01903	254 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	FAM200B	P0CF97	657 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	TIE1	P35590	1138 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	ATP5C1	P36542	298 aa	Known RBP	18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	PIK3CA	P42336	1068 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	ASPA	P45381	313 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	MAP3K7CL	P57077	242 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	INCA1	Q0VD86	236 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	KLHDC10	Q6PID8	442 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	TMEM92	Q6UXU6	159 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	CCDC150	Q8NCX0	1101 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	SPACA7	Q96KW9	195 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	NT5C1A	Q9BXI3	368 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	TPSD1	Q9BZJ3	242 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	CYLD	Q9NQC7	956 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	SCML2	Q9UQR0	700 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	STARD13	Q9Y3M8	1113 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	ATP6V1D	Q9Y5K8	247 aa		18.95	■□□□□ 0.62
GGA1-223	ENST00000491295	TBC1D3B	A6NDS4	549 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	KHNYN	O15037	678 aa	Known RBP	18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	BEST1	O76090	585 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	KLF8	O95600	359 aa	Predicted RBP	18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	CHRM1	P11229	460 aa	Predicted RBP	18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	KRT13	P13646	458 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	CCDC130	P13994	396 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	NR2F2	P24468	414 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	DPP6	P42658	865 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	PSEN1	P49768	467 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	C1orf220	Q5T0J3	134 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	C12orf40	Q86WS4	652 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	BBS7	Q8IWZ6	715 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	PHTF2	Q8N3S3	785 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	GUF1	Q8N442	669 aa	Known RBP	18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	ZNF276	Q8N554	614 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	TTC39C	Q8N584	583 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	C12orf29	Q8N999	325 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	CYFIP2	Q96F07	1278 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	WDR35	Q9P2L0	1181 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	PCDHA5	Q9Y5H7	936 aa		18.94	■□□□□ 0.62
GGA1-223	ENST00000491295	TPR	P12270	2363 aa	Known RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	SGK1	O00141	431 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	SCAMP3	O14828	347 aa	Known RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	TULP3	O75386	442 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	GTF2H1	P32780	548 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	PSMC2	P35998	433 aa	Known RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	P2RY2	P41231	377 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	MCCD1	P59942	119 aa	Predicted RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	MESP2	Q0VG99	397 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	DAB2IP	Q5VWQ8	1189 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	LPCAT2	Q7L5N7	544 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	CYP2U1	Q7Z449	544 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	TADA2B	Q86TJ2	420 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	CCDC34	Q96HJ3	373 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	EDEM2	Q9BV94	578 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	KLF16	Q9BXK1	252 aa	Predicted RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	SMOC1	Q9H4F8	434 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	FAM124B	Q9H5Z6	455 aa	Predicted RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	LSM7	Q9UK45	103 aa	Known RBP	18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	INVS	Q9Y283	1065 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	LAMA1	P25391	3075 aa		18.93	■□□□□ 0.62
GGA1-223	ENST00000491295	MYOF	Q9NZM1	2061 aa		18.93	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms