RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DCHS1Q96JQ0 3298 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 EML5Q05BV3 1969 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 SLC16A3O15427 465 aaKnown RBP19.01■□□□□ 0.63
HMGN1-219ENST00000491183 TLR5O60602 858 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 GADD45BO75293 160 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-219ENST00000491183 TBX18O95935 607 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 TRIM21P19474 475 aaKnown RBP19.01■□□□□ 0.63
HMGN1-219ENST00000491183 RAD23BP54727 409 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 LRRC63Q05C16 580 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 MESP2Q0VG99 397 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 DCAF17Q5H9S7 520 aaPredicted RBP19.01■□□□□ 0.63
HMGN1-219ENST00000491183 TCERG1LQ5VWI1 586 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 SYT13Q7L8C5 426 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 C12orf40Q86WS4 652 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 SLC4A11Q8NBS3 891 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 HEXIM2Q96MH2 286 aaKnown RBP19.01■□□□□ 0.63
HMGN1-219ENST00000491183 DUSP16Q9BY84 665 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 NMUR1Q9HB89 426 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 PNPLA8Q9NP80 782 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 TLR8Q9NR97 1041 aaKnown RBP19.01■□□□□ 0.63
HMGN1-219ENST00000491183 TBC1D14Q9P2M4 693 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 HOOK1Q9UJC3 728 aaKnown RBP19.01■□□□□ 0.63
HMGN1-219ENST00000491183 GMEB2Q9UKD1 530 aa19.01■□□□□ 0.63
HMGN1-219ENST00000491183 CCDC163A0A0D9SF12 145 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 CYP26A1O43174 497 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 ACO1P21399 889 aaKnown RBP19■□□□□ 0.63
HMGN1-219ENST00000491183 BMP6P22004 513 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 LY6G5CQ5SRR4 150 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 SFTPA1Q8IWL2 248 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 BBS7Q8IWZ6 715 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 CAMKK1Q8N5S9 505 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 GPR161Q8N6U8 529 aaKnown RBP19■□□□□ 0.63
HMGN1-219ENST00000491183 USP33Q8TEY7 942 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 HHIPQ96QV1 700 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 KLF16Q9BXK1 252 aaPredicted RBP19■□□□□ 0.63
HMGN1-219ENST00000491183 GTPBP4Q9BZE4 634 aaKnown RBP19■□□□□ 0.63
HMGN1-219ENST00000491183 CYLDQ9NQC7 956 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 SH3BP1Q9Y3L3 701 aa19■□□□□ 0.63
HMGN1-219ENST00000491183 DMXL1Q9Y485 3027 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 GREM1O60565 184 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 RETP07949 1114 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 IRF1P10914 325 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 KIF11P52732 1056 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 SPEM2Q0P670 501 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 DMC1Q14565 340 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 SCD5Q86SK9 330 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 SLC35C1Q96A29 364 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 TMEM176AQ96HP8 235 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 DHTKD1Q96HY7 919 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-219ENST00000491183 DUSP9Q99956 384 aaKnown RBP18.99■□□□□ 0.63
HMGN1-219ENST00000491183 ARMCX3Q9UH62 379 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-219ENST00000491183 USP3Q9Y6I4 520 aa18.99■□□□□ 0.63
HMGN1-219ENST00000491183 A0A0A0MRY4 1105 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 A0A1W2PQH9 124 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 PPP1R3GB7ZBB8 358 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 PSMA7O14818 248 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 ADH1CP00326 375 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 CHRM1P11229 460 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-219ENST00000491183 ADH5P11766 374 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 ATP5C1P36542 298 aaKnown RBP18.98■□□□□ 0.63
HMGN1-219ENST00000491183 EIF2DP41214 584 aaKnown RBP18.98■□□□□ 0.63
HMGN1-219ENST00000491183 SEC13P55735 322 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 C2orf27AQ580R0 203 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 HTR3DQ70Z44 454 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 CEP68Q76N32 757 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 TMEM25Q86YD3 366 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 TTC39CQ8N584 583 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 FAM160A2Q8N612 972 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-219ENST00000491183 GAB3Q8WWW8 586 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 OTUB2Q96DC9 234 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 PNKPQ96T60 521 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 NACA2Q9H009 215 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 DLL3Q9NYJ7 618 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 NUDT5Q9UKK9 219 aa18.98■□□□□ 0.63
HMGN1-219ENST00000491183 RALGAPA1Q6GYQ0 2036 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 MDM4O15151 490 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 RPP40O75818 363 aaKnown RBP18.97■□□□□ 0.63
HMGN1-219ENST00000491183 RARGP13631 454 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 GAD2Q05329 585 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 RSPO4Q2I0M5 234 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-219ENST00000491183 EMC10Q5UCC4 262 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 ARHGAP17Q68EM7 881 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 TTI2Q6NXR4 508 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 CCDC186Q7Z3E2 898 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-219ENST00000491183 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 ACDQ96AP0 544 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 DNAI2Q9GZS0 605 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 FAM124BQ9H5Z6 455 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-219ENST00000491183 SPHK2Q9NRA0 654 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.97■□□□□ 0.63
HMGN1-219ENST00000491183 USP18Q9UMW8 372 aa18.97■□□□□ 0.63
HMGN1-219ENST00000491183 AXIN1O15169 862 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 KAT7O95251 611 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 LRMPQ12912 555 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 STIM1Q13586 685 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 CUL2Q13617 745 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 MORC3Q14149 939 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 KLHL10Q6JEL2 608 aa18.96■□□□□ 0.63
HMGN1-219ENST00000491183 KLHDC10Q6PID8 442 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms