RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 LOXL4Q96JB6 756 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 ARID3AQ99856 593 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 LSM14BQ9BX40 385 aaKnown RBP9.38□□□□□ -0.91
SKAP2-207ENST00000490456 VPS16Q9H269 839 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 HSD3B7Q9H2F3 369 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 DPEP3Q9H4B8 488 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 TRPV5Q9NQA5 729 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 TMLHEQ9NVH6 421 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 ABI2Q9NYB9 513 aaPredicted RBP9.38□□□□□ -0.91
SKAP2-207ENST00000490456 HMGXB4Q9UGU5 601 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 GTF3C4Q9UKN8 822 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 MRPS23Q9Y3D9 190 aaKnown RBP9.38□□□□□ -0.91
SKAP2-207ENST00000490456 NME7Q9Y5B8 376 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 DSPP15924 2871 aaKnown RBP9.38□□□□□ -0.91
SKAP2-207ENST00000490456 LAMA1P25391 3075 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 VWA8A3KMH1 1905 aa9.38□□□□□ -0.91
SKAP2-207ENST00000490456 MYBPHLA2RUH7 354 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 GTPBP10A4D1E9 387 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 ATP2C2O75185 946 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 SEC24AO95486 1093 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 VNN2O95498 520 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 PTPN1P18031 435 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 SLC9A1P19634 815 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 TBXAS1P24557 533 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 NDST1P52848 882 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 COPB1P53618 953 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 YWHAEP62258 255 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 SMARCB1Q12824 385 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 DUSP4Q13115 394 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 LRRC32Q14392 662 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 SF3A2Q15428 464 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 NFE2Q16621 373 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 MGAT5BQ3V5L5 792 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 MDH1BQ5I0G3 518 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 FKBP15Q5T1M5 1219 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 C1orf228Q6PIY5 440 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 TRIM65Q6PJ69 517 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 RRAGAQ7L523 313 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 UNC93AQ86WB7 457 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 SPATA2LQ8IUW3 424 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 ARHGEF19Q8IW93 802 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 TCEAL8Q8IYN2 117 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 B3GALNT2Q8NCR0 500 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 C2orf15Q8WU43 125 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 ING5Q8WYH8 240 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 MYLPFQ96A32 169 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 MCRS1Q96EZ8 462 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 MSANTD3Q96H12 275 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 TNIP3Q96KP6 325 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 PKMYT1Q99640 499 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 SEPT5Q99719 369 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 LPIN3Q9BQK8 851 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 TRMT61BQ9BVS5 477 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 PLA2G2FQ9BZM2 168 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 CRTAC1Q9NQ79 661 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 AVENQ9NQS1 362 aaPredicted RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 CISHQ9NSE2 258 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 DNMT3BQ9UBC3 853 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 LIMA1Q9UHB6 759 aaKnown RBP9.37□□□□□ -0.91
SKAP2-207ENST00000490456 MAFFQ9ULX9 164 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 PCDHB5Q9Y5E4 795 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 INSL5Q9Y5Q6 135 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 WDFY3Q8IZQ1 3526 aa9.37□□□□□ -0.91
SKAP2-207ENST00000490456 SRRM3A6NNA2 597 aaPredicted RBP9.36□□□□□ -0.91
SKAP2-207ENST00000490456 CILPO75339 1184 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 SOAT2O75908 522 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 EPN2O95208 641 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 LRG1P02750 347 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 CHRNB1P11230 501 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 TRIM21P19474 475 aaKnown RBP9.36□□□□□ -0.91
SKAP2-207ENST00000490456 PON1P27169 355 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 HOXA6P31267 233 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 ZNF445P59923 1031 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 CYP27A1Q02318 531 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 APBA1Q02410 837 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 GCNT1Q02742 428 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 TWF1Q12792 350 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 SRSF5Q13243 272 aaKnown RBP9.36□□□□□ -0.91
SKAP2-207ENST00000490456 MAPRE1Q15691 268 aaKnown RBP9.36□□□□□ -0.91
SKAP2-207ENST00000490456 TANGO2Q6ICL3 276 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 PSAPL1Q6NUJ1 521 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 FAM171BQ6P995 826 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 C4orf50Q6ZRC1 276 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 ACOT1Q86TX2 421 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 TTC39CQ8N584 583 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 TTC9BQ8N6N2 239 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 RNF214Q8ND24 703 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 MYCBPAPQ8TBZ2 947 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 SPPL2BQ8TCT7 592 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 HPS1Q92902 700 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 KAT5Q92993 513 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 TWNKQ96RR1 684 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 NT5C1AQ9BXI3 368 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 DNAI2Q9GZS0 605 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 ARRDC1-AS1Q9H2J1 176 aa9.36□□□□□ -0.91
SKAP2-207ENST00000490456 CRISPLD1Q9H336 500 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms