RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CDHR3Q6ZTQ4 885 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 RFX8Q6ZV50 586 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 DCAKDQ8WVC6 231 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 CNPY3Q9BT09 278 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 ACSS3Q9H6R3 686 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 RSAD1Q9HA92 442 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 CYB561D2O14569 222 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 GABBR2O75899 941 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 VDRP11473 427 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 IL4RP24394 825 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 EPHB2P29323 1055 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 CCDC91Q7Z6B0 441 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 MPP5Q8N3R9 675 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 RIBC1Q8N443 379 aaPredicted RBP16.36■□□□□ 0.21
BRD9-208ENST00000489816 GIMAP7Q8NHV1 300 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 PCDH19Q8TAB3 1148 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 N4BP2L2Q92802 583 aaPredicted RBP16.36■□□□□ 0.21
BRD9-208ENST00000489816 OSMRQ99650 979 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 SNRNP25Q9BV90 132 aaKnown RBP16.36■□□□□ 0.21
BRD9-208ENST00000489816 FOXP3Q9BZS1 431 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 ACTL7BQ9Y614 415 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 LAMA3Q16787 3333 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 DNAJC25-GNG10A0A024R161 153 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
BRD9-208ENST00000489816 UNC5CO95185 931 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 SLC25A27O95847 323 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 IGFBP6P24592 240 aaPredicted RBP16.36■□□□□ 0.21
BRD9-208ENST00000489816 LMO2P25791 158 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 GMPRP36959 345 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 NR1H3Q13133 447 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 MDH1BQ5I0G3 518 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 TRMT10BQ6PF06 316 aaKnown RBP16.36■□□□□ 0.21
BRD9-208ENST00000489816 NSMCE1Q8WV22 266 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 RNF157Q96PX1 679 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 SMG5Q9UPR3 1016 aaKnown RBP16.36■□□□□ 0.21
BRD9-208ENST00000489816 TSPAN1O60635 241 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 GJA5P36382 358 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 NLRP9Q7RTR0 991 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 PCGF5Q86SE9 256 aa16.36■□□□□ 0.21
BRD9-208ENST00000489816 LOC102724159A0A0B4J2E5 919 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 TRIM49D1C9J1S8 452 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 PRPF4O43172 522 aaKnown RBP eCLIP16.35■□□□□ 0.215e-7■■■■■ 27.5
BRD9-208ENST00000489816 PAPSS1O43252 624 aaPredicted RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 SDC4P31431 198 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 RBP5P82980 135 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 MOGSQ13724 837 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 PWP2Q15269 919 aaKnown RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 PREPLQ4J6C6 727 aaPredicted RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 WDR35Q9P2L0 1181 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 SLC24A2Q9UI40 661 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 USH1CQ9Y6N9 552 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 A8MXQ7 604 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 GAS2O43903 313 aaKnown RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 CPA2P48052 419 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 NOMO1Q15155 1222 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 MROH9Q5TGP6 573 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 ADGRD1Q6QNK2 874 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 TTC7BQ86TV6 843 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 PQLC3Q8N755 202 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 FAM149B1Q96BN6 582 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 NXF3Q9H4D5 531 aaKnown RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 USP29Q9HBJ7 922 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 ARHGEF3Q9NR81 526 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 ARMCX1Q9P291 453 aa16.35■□□□□ 0.21
BRD9-208ENST00000489816 ZC3H7BQ9UGR2 993 aaKnown RBP16.35■□□□□ 0.21
BRD9-208ENST00000489816 LAMA2P24043 3122 aaKnown RBP16.34■□□□□ 0.21
BRD9-208ENST00000489816 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 METTL18O95568 372 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 P4HA1P13674 534 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 ZBTB16Q05516 673 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 RNF43Q68DV7 783 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 CEP128Q6ZU80 1094 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 FAM131BQ86XD5 332 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 TDRPQ86YL5 185 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 GBP7Q8N8V2 638 aaPredicted RBP16.34■□□□□ 0.21
BRD9-208ENST00000489816 CYTH2Q99418 400 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 MANSC1Q9H8J5 431 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 ETNK2Q9NVF9 386 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 LTBP3Q9NS15 1303 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 T-ENOLP0DO92 83 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 SLC10A2Q12908 348 aaPredicted RBP16.34■□□□□ 0.21
BRD9-208ENST00000489816 TAPT1Q6NXT6 567 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 MTHFD1LQ6UB35 978 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 CATSPER4Q7RTX7 472 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 PCDH18Q9HCL0 1135 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 NKX1-2Q9UD57 310 aaPredicted RBP16.34■□□□□ 0.21
BRD9-208ENST00000489816 STARD13Q9Y3M8 1113 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 MCF2P10911 925 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 AMPD1P23109 780 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 ALDH3A1P30838 453 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 PTPN7P35236 360 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 PITX1P78337 314 aaPredicted RBP16.34■□□□□ 0.21
BRD9-208ENST00000489816 OLIG2Q13516 323 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms