RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 SCAMP3O14828 347 aaKnown RBP18.79■□□□□ 0.6
ABCF3-217ENST00000489719 CYP26A1O43174 497 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 TBX18O95935 607 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 AFPP02771 609 aaKnown RBP18.79■□□□□ 0.6
ABCF3-217ENST00000489719 RALAP11233 206 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 VDRP11473 427 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 RARGP13631 454 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 PGFP49763 221 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 MLKLQ8NB16 471 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 OTUB2Q96DC9 234 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 NAGPAQ9UK23 515 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 PCDHB4Q9Y5E5 795 aa18.79■□□□□ 0.6
ABCF3-217ENST00000489719 PAPSS2O95340 614 aaPredicted RBP18.78■□□□□ 0.6
ABCF3-217ENST00000489719 ADH1CP00326 375 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 IRF1P10914 325 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 PLA2G4AP47712 749 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 MARSP56192 900 aaKnown RBP18.78■□□□□ 0.6
ABCF3-217ENST00000489719 TPD52L1Q16890 204 aaPredicted RBP18.78■□□□□ 0.6
ABCF3-217ENST00000489719 C10orf120Q5SQS8 335 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 RHBDF2Q6PJF5 856 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 TMEM270Q6UE05 265 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 CCDC186Q7Z3E2 898 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 PIGZQ86VD9 579 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 ARHGAP18Q8N392 663 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 ZFRQ96KR1 1074 aaKnown RBP18.78■□□□□ 0.6
ABCF3-217ENST00000489719 CDK5RAP1Q96SZ6 601 aaKnown RBP18.78■□□□□ 0.6
ABCF3-217ENST00000489719 HINFPQ9BQA5 517 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 CLSTN2Q9H4D0 955 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 CYLDQ9NQC7 956 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 DNMT3LQ9UJW3 386 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 SLC8A2Q9UPR5 921 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 USP3Q9Y6I4 520 aa18.78■□□□□ 0.6
ABCF3-217ENST00000489719 CACNA1IQ9P0X4 2223 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 LILRB5O75023 590 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 RNF40O75150 1001 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 CYP17A1P05093 508 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 PAEPP09466 180 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 TDGF1P13385 188 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 GOLGA7BQ2TAP0 167 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 BTBD8Q5XKL5 378 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 NAIF1Q69YI7 327 aaPredicted RBP18.77■□□□□ 0.6
ABCF3-217ENST00000489719 KLHDC10Q6PID8 442 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 RRAGAQ7L523 313 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 LMO3Q8TAP4 145 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 KLF16Q9BXK1 252 aaPredicted RBP18.77■□□□□ 0.6
ABCF3-217ENST00000489719 NMUR1Q9HB89 426 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.77■□□□□ 0.6
ABCF3-217ENST00000489719 OSER1Q9NX31 292 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 LSM7Q9UK45 103 aaKnown RBP18.77■□□□□ 0.6
ABCF3-217ENST00000489719 TSPAN16Q9UKR8 245 aa18.77■□□□□ 0.6
ABCF3-217ENST00000489719 MIA3Q5JRA6 1907 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 CHURC1-FNTBB4DL54 471 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 FNTBP49356 437 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 BCAT1P54687 386 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 GAD2Q05329 585 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 HEATR6Q6AI08 1181 aaKnown RBP18.76■□□□□ 0.59
ABCF3-217ENST00000489719 HTR3DQ70Z44 454 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 SCD5Q86SK9 330 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 LONP2Q86WA8 852 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 ZNF276Q8N554 614 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 SUMF1Q8NBK3 374 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 UBA3Q8TBC4 463 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 RUBCNQ92622 972 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 SECISBP2LQ93073 1101 aaKnown RBP18.76■□□□□ 0.59
ABCF3-217ENST00000489719 PNKPQ96T60 521 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 LRRC4Q9HBW1 653 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 CLIC5Q9NZA1 410 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 NUDT5Q9UKK9 219 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 RAB23Q9ULC3 237 aa18.76■□□□□ 0.59
ABCF3-217ENST00000489719 COL4A2P08572 1712 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 K7ESF4 209 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 XPO1O14980 1071 aaKnown RBP18.75■□□□□ 0.59
ABCF3-217ENST00000489719 ADH5P11766 374 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 HOXA6P31267 233 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 CNR2P34972 360 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 OPRD1P41143 372 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 TKTL1P51854 596 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 PDE4CQ08493 712 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 BST2Q10589 180 aaKnown RBP18.75■□□□□ 0.59
ABCF3-217ENST00000489719 LY6G5CQ5SRR4 150 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 TTC30AQ86WT1 665 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 BBS7Q8IWZ6 715 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 UBR7Q8N806 425 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 INTS2Q9H0H0 1204 aaKnown RBP18.75■□□□□ 0.59
ABCF3-217ENST00000489719 NUP62CLQ9H1M0 184 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 C2orf42Q9NWW7 574 aa18.75■□□□□ 0.59
ABCF3-217ENST00000489719 PTPRDP23468 1912 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 ZBED1O96006 694 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 APODP05090 189 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 EIF2DP41214 584 aaKnown RBP18.74■□□□□ 0.59
ABCF3-217ENST00000489719 SLC6A11P48066 632 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 COG7P83436 770 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 GCNT1Q02742 428 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 STILQ15468 1287 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 CNGA2Q16280 664 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 ANO4Q32M45 955 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 PREPLQ4J6C6 727 aaPredicted RBP18.74■□□□□ 0.59
ABCF3-217ENST00000489719 RAB41Q5JT25 222 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 PKN3Q6P5Z2 889 aa18.74■□□□□ 0.59
ABCF3-217ENST00000489719 LCLAT1Q6UWP7 414 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms