RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP11-211ENST00000489111 KLHL11Q9NVR0 708 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP11-211ENST00000489111 PCSK1NQ9UHG2 260 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 MTUS1Q9ULD2 1270 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 TTC7AQ9ULT0 858 aaPredicted RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 SSX2IPQ9Y2D8 614 aa10.48□□□□□ -0.73
USP11-211ENST00000489111 V9GYY5 206 aaPredicted RBP10.48□□□□□ -0.73
USP11-211ENST00000489111 WDR27A2RRH5 827 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 LRRD1A4D1F6 860 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 YJEFN3A6XGL0 299 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 E7ENQ6 273 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 ADAM12O43184 909 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 RTN3O95197 1032 aaPredicted RBP10.47□□□□□ -0.73
USP11-211ENST00000489111 HAPLN1P10915 354 aaPredicted RBP10.47□□□□□ -0.73
USP11-211ENST00000489111 TCF4P15884 667 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 NOS2P35228 1153 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 MAGEA10P43363 369 aaPredicted RBP10.47□□□□□ -0.73
USP11-211ENST00000489111 TUFMP49411 452 aaKnown RBP10.47□□□□□ -0.73
USP11-211ENST00000489111 GPR15P49685 360 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 SLC25A11Q02978 314 aaKnown RBP10.47□□□□□ -0.73
USP11-211ENST00000489111 DDR2Q16832 855 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 SMTNL2Q2TAL5 461 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 SLC25A52Q3SY17 297 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 SDHAF4Q5VUM1 108 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 TPGS2Q68CL5 300 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 PM20D1Q6GTS8 502 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 SCYL2Q6P3W7 929 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 STRADAQ7RTN6 431 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 GPR65Q8IYL9 337 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 RCOR2Q8IZ40 523 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 NUP93Q8N1F7 819 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 ARHGAP18Q8N392 663 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 TTC9BQ8N6N2 239 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 KLHL23Q8NBE8 558 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 SCAMP5Q8TAC9 235 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 MAIP1Q8WWC4 291 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 HSPH1Q92598 858 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP11-211ENST00000489111 TBCBQ99426 244 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 ZBP1Q9H171 429 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 FAM204AQ9H8W3 233 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 RRN3Q9NYV6 651 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
USP11-211ENST00000489111 USP18Q9UMW8 372 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 USP3Q9Y6I4 520 aa10.47□□□□□ -0.73
USP11-211ENST00000489111 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 LCHNA4D1U4 455 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 PI4K2BG5E9Z4 385 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 CCDC188H7C350 402 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 PRRG1O14668 218 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 TNFRSF10BO14763 440 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 CTIFO43310 598 aaKnown RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 LPXNO60711 386 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 SOAT2O75908 522 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 TRUB2O95900 331 aaKnown RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 NCAM1P13591 858 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 ELF1P32519 619 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 RDXP35241 583 aaKnown RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 BMPR1AP36894 532 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 COPS2P61201 443 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 YWHAGP61981 247 aaKnown RBP eCLIP10.46□□□□□ -0.73
USP11-211ENST00000489111 DEUP1Q05D60 604 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 DUSP4Q13115 394 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 KRT81Q14533 505 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 VEPH1Q14D04 833 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 COL13A1Q5TAT6 717 aaPredicted RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 SH3PXD2AQ5TCZ1 1133 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 RASIP1Q5U651 963 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 BSPRYQ5W0U4 402 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 BTBD8Q5XKL5 378 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 AADACL2Q6P093 401 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 DENND5BQ6ZUT9 1274 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 HFE2Q6ZVN8 426 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 SND1Q7KZF4 910 aaKnown RBP eCLIP10.46□□□□□ -0.73
USP11-211ENST00000489111 SLC13A5Q86YT5 568 aaPredicted RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 ARFGAP1Q8N6T3 406 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 KCTD6Q8NC69 237 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 SLC7A14Q8TBB6 771 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 TEKT4Q8WW24 435 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 AUTS2Q8WXX7 1259 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 EDEM1Q92611 657 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 FBXO32Q969P5 355 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 ACSF2Q96CM8 615 aaPredicted RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 SPATA17Q96L03 361 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 CEP295NLQ96MC4 621 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 CLSTN3Q9BQT9 956 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 AP1M1Q9BXS5 423 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 ENTPD7Q9NQZ7 604 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 RBM12Q9NTZ6 932 aaKnown RBP10.46□□□□□ -0.73
USP11-211ENST00000489111 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.46□□□□□ -0.73
USP11-211ENST00000489111 COMMD8Q9NX08 183 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 SCML2Q9UQR0 700 aa10.46□□□□□ -0.73
USP11-211ENST00000489111 SYNJ2BP-COX16A0A087WUM0 186 aa10.45□□□□□ -0.74
USP11-211ENST00000489111 LINC01553A4QN01 128 aa10.45□□□□□ -0.74
USP11-211ENST00000489111 M0QYT0 321 aa10.45□□□□□ -0.74
USP11-211ENST00000489111 VNN2O95498 520 aa10.45□□□□□ -0.74
USP11-211ENST00000489111 LINC00271P0C7V0 271 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms