RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CYP17A1P05093 508 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 HOXC13P31276 330 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 KIF11P52732 1056 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 NR1H3Q13133 447 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 ARHGAP17Q68EM7 881 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 ADGRG2Q8IZP9 1017 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 SUMF1Q8NBK3 374 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 WBP2Q969T9 261 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 NMUR1Q9HB89 426 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 TLR8Q9NR97 1041 aaKnown RBP26.37■■□□□ 1.81
HMGN1-217ENST00000489072 TLR5O60602 858 aa26.36■■□□□ 1.81
HMGN1-217ENST00000489072 TBX18O95935 607 aa26.36■■□□□ 1.81
HMGN1-217ENST00000489072 DMWDQ09019 674 aa26.36■■□□□ 1.81
HMGN1-217ENST00000489072 PPP2R5DQ14738 602 aa26.36■■□□□ 1.81
HMGN1-217ENST00000489072 TRIM59Q8IWR1 403 aa26.36■■□□□ 1.81
HMGN1-217ENST00000489072 LMO3Q8TAP4 145 aa26.36■■□□□ 1.81
HMGN1-217ENST00000489072 CD101Q93033 1021 aa26.36■■□□□ 1.81
HMGN1-217ENST00000489072 SRRTQ9BXP5 876 aaKnown RBP26.36■■□□□ 1.81
HMGN1-217ENST00000489072 A0A1W2PQH9 124 aa26.35■■□□□ 1.81
HMGN1-217ENST00000489072 E2F8A0AVK6 867 aa26.35■■□□□ 1.81
HMGN1-217ENST00000489072 SLC9A3R1O14745 358 aaPredicted RBP26.35■■□□□ 1.81
HMGN1-217ENST00000489072 DRD1P21728 446 aa26.35■■□□□ 1.81
HMGN1-217ENST00000489072 OPRD1P41143 372 aa26.35■■□□□ 1.81
HMGN1-217ENST00000489072 MARSP56192 900 aaKnown RBP26.35■■□□□ 1.81
HMGN1-217ENST00000489072 MED15Q96RN5 788 aa26.35■■□□□ 1.81
HMGN1-217ENST00000489072 CYLDQ9NQC7 956 aa26.35■■□□□ 1.81
HMGN1-217ENST00000489072 USP3Q9Y6I4 520 aa26.35■■□□□ 1.81
HMGN1-217ENST00000489072 RNF40O75150 1001 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 NRLP54845 237 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 DHCR24Q15392 516 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 RHBDF2Q6PJF5 856 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 SCD5Q86SK9 330 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 TTC30AQ86WT1 665 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 KAT5Q92993 513 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 NACA2Q9H009 215 aa26.34■■□□□ 1.81
HMGN1-217ENST00000489072 P4HA2O15460 535 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 GNA14O95837 355 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 IRF1P10914 325 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 TBXAS1P24557 533 aaPredicted RBP26.33■■□□□ 1.81
HMGN1-217ENST00000489072 YWHAEP62258 255 aaKnown RBP26.33■■□□□ 1.81
HMGN1-217ENST00000489072 KCNH2Q12809 1159 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 GOLGA7BQ2TAP0 167 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 CCDC186Q7Z3E2 898 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 ANKRD52Q8NB46 1076 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 NT5C1BQ96P26 610 aa26.33■■□□□ 1.81
HMGN1-217ENST00000489072 KLF16Q9BXK1 252 aaPredicted RBP26.33■■□□□ 1.81
HMGN1-217ENST00000489072 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.33■■□□□ 1.81
HMGN1-217ENST00000489072 CHURC1-FNTBB4DL54 471 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 RARGP13631 454 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 FNTBP49356 437 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 SGO2Q562F6 1265 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 PIGZQ86VD9 579 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 EXOC4Q96A65 974 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 UBXN6Q9BZV1 441 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 EPC1Q9H2F5 836 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 CLSTN2Q9H4D0 955 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 POLR3BQ9NW08 1133 aaPredicted RBP26.32■■□□□ 1.8
HMGN1-217ENST00000489072 TBC1D14Q9P2M4 693 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 RWDD2AQ9UIY3 292 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 NUDT5Q9UKK9 219 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 TSPAN16Q9UKR8 245 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 SH3BP1Q9Y3L3 701 aa26.32■■□□□ 1.8
HMGN1-217ENST00000489072 TULP2O00295 520 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 MDM4O15151 490 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 GREM1O60565 184 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 CD19P15391 556 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 ATP5C1P36542 298 aaKnown RBP26.31■■□□□ 1.8
HMGN1-217ENST00000489072 FBXO43Q4G163 708 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 RAB41Q5JT25 222 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 ARHGEF19Q8IW93 802 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 BBS7Q8IWZ6 715 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 PPM1KQ8N3J5 372 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 NAGPAQ9UK23 515 aa26.31■■□□□ 1.8
HMGN1-217ENST00000489072 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.31■■□□□ 1.8
HMGN1-217ENST00000489072 DMXL1Q9Y485 3027 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 AFPP02771 609 aaKnown RBP26.3■■□□□ 1.8
HMGN1-217ENST00000489072 SLC6A11P48066 632 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 PDE4CQ08493 712 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 MESP2Q0VG99 397 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 CETN1Q12798 172 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 LY6G5CQ5SRR4 150 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 HEATR6Q6AI08 1181 aaKnown RBP26.3■■□□□ 1.8
HMGN1-217ENST00000489072 TMEM270Q6UE05 265 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 C12orf40Q86WS4 652 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 EHBP1Q8NDI1 1231 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 OTUB2Q96DC9 234 aa26.3■■□□□ 1.8
HMGN1-217ENST00000489072 SMG5Q9UPR3 1016 aaKnown RBP26.3■■□□□ 1.8
HMGN1-217ENST00000489072 ANTXRLA6NF34 631 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 RNF225M0QZC1 329 aaPredicted RBP26.29■■□□□ 1.8
HMGN1-217ENST00000489072 O00370 1275 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 ADH1CP00326 375 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 CCDC192P0DO97 292 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 VDRP11473 427 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 ADH5P11766 374 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 HOXA6P31267 233 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 BCAT1P54687 386 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 KLHDC10Q6PID8 442 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 CLEC17AQ6ZS10 378 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 RRAGAQ7L523 313 aa26.29■■□□□ 1.8
HMGN1-217ENST00000489072 RPLP0P6Q8NHW5 317 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms