RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CEP170P1Q96L14 293 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 TGS1Q96RS0 853 aaKnown RBP8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 USP28Q96RU2 1077 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 MAP7D2Q96T17 732 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 HSD17B14Q9BPX1 270 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 ORAI3Q9BRQ5 295 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 FTOQ9C0B1 505 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 FAM49AQ9H0Q0 323 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 ANKEF1Q9NU02 776 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 RIC8BQ9NVN3 520 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 MTUS1Q9ULD2 1270 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 SRPRBQ9Y5M8 271 aaKnown RBP8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 COL4A3BPQ9Y5P4 624 aa8.85□□□□□ -0.99
TRAPPC12-221ENST00000489032 hCG_2014768A0A024R1R8 64 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 SMIM35A0A1B0GVV1 85 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 LCHNA4D1U4 455 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 TMEM221A6NGB7 291 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 M0R296 226 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 SCDO00767 359 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 SPTLC2O15270 562 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 TECTAO75443 2155 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 BAIAP3O94812 1187 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 CKBP12277 381 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 MARCKSP29966 332 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 GJA4P35212 333 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 POLGP54098 1239 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 ERVK-21P61565 698 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 ADAM17P78536 824 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 IRF9Q00978 393 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 OCRLQ01968 901 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 STRN3Q13033 797 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 PKP1Q13835 747 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 TARBP2Q15633 366 aaKnown RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 BTBD8Q5XKL5 378 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 EFCAB12Q6NXP0 572 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 ETV3LQ6ZN32 361 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 LRRC8DQ7L1W4 858 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 C11orf74Q86VG3 221 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 CATSPER3Q86XQ3 398 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 RBM12BQ8IXT5 1001 aaKnown RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 NXPE1Q8N323 547 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 NME8Q8N427 588 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 FBXO15Q8NCQ5 510 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 TRAPPC12Q8WVT3 735 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 DNAJB3Q8WWF6 145 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 NT5C3AQ9H0P0 336 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 SMURF1Q9HCE7 757 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 NGRNQ9NPE2 291 aaKnown RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 MCM8Q9UJA3 840 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 DNM3Q9UQ16 869 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 MORC2Q9Y6X9 1032 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 SIP14410 1827 aa8.84□□□□□ -0.99
TRAPPC12-221ENST00000489032 CACNA1BQ00975 2339 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 KMT2EQ8IZD2 1858 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 ARHGEF35A5YM69 484 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 RSPH10B2B2RC85 870 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 MAN2B1O00754 1011 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PPP6R2O75170 966 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 MED24O75448 989 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 C22orf31O95567 290 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 IQCF3P0C7M6 154 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 RSPH10BP0C881 870 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 NCAM1P13591 858 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PFKLP17858 780 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 CDC42EP1Q00587 391 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 GRIN1Q05586 938 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PTPAQ15257 358 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 DHCR24Q15392 516 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 IL17AQ16552 155 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 MARCH8Q5T0T0 291 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PLA2G4FQ68DD2 849 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 ANO5Q75V66 913 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 RPAINQ86UA6 219 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 ZC3H18Q86VM9 953 aaKnown RBP8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PASD1Q8IV76 773 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 LINC00301Q8NCQ3 95 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 ATL2Q8NHH9 583 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PIGOQ8TEQ8 1089 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 TCP11Q8WWU5 503 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 SCLT1Q96NL6 688 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 TTC1Q99614 292 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PCIF1Q9H4Z3 704 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 DDX19AQ9NUU7 478 aaKnown RBP8.83□□□□□ -1
TRAPPC12-221ENST00000489032 FAN1Q9Y2M0 1017 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 DCHS1Q96JQ0 3298 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PLXNA3P51805 1871 aa8.83□□□□□ -1
TRAPPC12-221ENST00000489032 PTPRSQ13332 1948 aa8.82□□□□□ -1
TRAPPC12-221ENST00000489032 PROB1E7EW31 1015 aa8.82□□□□□ -1
TRAPPC12-221ENST00000489032 CUTAO60888 179 aa8.82□□□□□ -1
TRAPPC12-221ENST00000489032 CLASP2O75122 1294 aaKnown RBP8.82□□□□□ -1
TRAPPC12-221ENST00000489032 MAFO75444 373 aaPredicted RBP8.82□□□□□ -1
TRAPPC12-221ENST00000489032 STBD1O95210 358 aa8.82□□□□□ -1
TRAPPC12-221ENST00000489032 ME1P48163 572 aa8.82□□□□□ -1
TRAPPC12-221ENST00000489032 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
TRAPPC12-221ENST00000489032 CLCN3P51790 818 aa8.82□□□□□ -1
TRAPPC12-221ENST00000489032 KPNA1P52294 538 aaPredicted RBP8.82□□□□□ -1
TRAPPC12-221ENST00000489032 NPEPPSP55786 919 aa8.82□□□□□ -1
TRAPPC12-221ENST00000489032 MRPS6P82932 125 aaKnown RBP8.82□□□□□ -1
TRAPPC12-221ENST00000489032 TRIM71Q2Q1W2 868 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms